S/U clan
[fasta] [only sure] [only unsure]
Description
The X-ray structure of one member of this phycobilin lyase group was determined at 2.8 Å resolution : CpcS-III from Thermosynechococcus elongatus BP1 (Kuzin et al., 2007; Kupka et al., 2009; Schluchter el al., 2010; PDB: 3BDR). CpcS-III is structurally related to the calyx-shaped lipocalin family (InterPro IPR002345). It possesses a 8-stranded anti-parallel, β-barrel structure with an α-helix. Searches using Phyre2 show that all members of the S/U clan have the same fold.
References
- Kupka et al., 2009. Catalytic mechanism of S-type phycobiliprotein lyase: chaperone-like action and functional amino acid residues J Biol Chem, 284, 36405-36414.
- Kuzin et al., 2007. Crystal Structure Of Fatty Acid-Binding Protein-Like Ycf58 From Thermosynecoccus Elongatus. Northeast Structural Genomics Consortium Target Ter13 Protein Data Base, PDB_ID: 3BDR.
- Schluchter et al., 2010. Phycobiliprotein Biosynthesis in Cyanobacteria: Structure and Function of Enzymes Involved in Post-translational Modification Adv Exp Med Biol, 675, 211-228.
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpcS family | AM1_4215 | YP_001518512.1 | Acaryochloris marina | MBIC11017 (AM1) | PC | 1 | 1st copy, strange position in phylogeny. By blast: closer from CpcSI. | 197 | 08-20-2012 |
| CpcS family | AM1_C0217 | YP_001521653.1 | Acaryochloris marina | MBIC11017 (AM1) | PC | 1 | 2nd copy,strange position in phylogeny. By blast: closer from CpcSI. Located on preb3 plasmid. | 208 | 08-20-2012 |
| CpcS family | CMR092C | Cyanidioschyzon merolae | 10D | PC | 1 | long N-term compared to cyanobacterial CpcS sequences, found by tblastn | 405 | 02-21-2012 | |
| CpcS-I subfamily | S7335_4321 | ZP_05037881.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | This sequence is closely related to CpcS-I, but the genome of PCC7335 apparently does not contain any CpcU-I, possibly because it is incomplete. | 200 | 10-03-2012 |
| CpcS-I subfamily | SYNPCC7002_A1822 | YP_001735066.1 | Synechococcus sp. | PCC7002 | PC | 1 | 198 | 09-26-2011 | |
| CpcS-I subfamily | slr2049 | NP_440437.1 | Synechocystis sp. | PCC6803 (ATCC27184) | PC | 1 | 192 | 09-26-2011 | |
| CpcS-I subfamily | AmaxDRAFT_2794 | ZP_03273970.1 | Arthrospira (Spirulina) maxima | CS-328 | PC | 1 | 197 | 09-26-2011 | |
| CpcS-I subfamily | CwatDRAFT_6342 | ZP_00514111.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 197 | 09-26-2011 | ||
| CpcS-I subfamily | cce_3207 | YP_001804621.1 | Cyanothece sp. | ATCC51142 | PC | 1 | 198 | 09-26-2011 | |
| CpcS-I subfamily | PCC7424_3509 | YP_002378769.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 197 | 09-26-2011 | |
| CpcS-I subfamily | PCC8801_1352 | YP_002371570.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 200 | 09-26-2011 | |
| CpcS-I subfamily | Cyan8802_1382 | YP_003137135.1 | Cyanothece sp. | PCC8802 | PC | 1 | 200 | 09-26-2011 | |
| CpcS-I subfamily | CY0110_04081 | ZP_01730273.1 | Cyanothece sp. | CCY0110 | PC | 1 | 197 | 09-26-2011 | |
| CpcS-I subfamily | Cyan7822_2533 | YP_003887780.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 198 | 09-26-2011 | |
| CpcS-I subfamily | gvip161 | NP_924137.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | strange position in phylogenetic trees | 201 | 01-18-2018 |
| CpcS-I subfamily | GL6909_5285 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 198 | 05-31-2011 | ||
| CpcS-I subfamily | L8106_24665 | ZP_01619909.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | No other start codon before this sequence | 197 | 09-26-2011 |
| CpcS-I subfamily | MAE_48330 | YP_001659847.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | A stop codon, then 4aa, then the start codon | 193 | 09-26-2011 |
| CpcS-I subfamily | Npun_F3809 | YP_001867136.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | CpcSIII in Schluchter et al., 2010? | 206 | 09-26-2011 |
| CpcS-I subfamily | Synpcc7942_2031 | YP_401048.1 | Synechococcus elongatus | PCC7942 | PC | 1 | 193 | 09-26-2011 | |
| CpcS-I subfamily | syc2064_d | YP_172774.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 193 | 11-25-2011 | |
| CpcS-I subfamily | Tery_3908 | YP_723414.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | N-term shortened (5 aa removed: MEYRL) | 196 | 08-30-2012 | |
| CpcS-I subfamily | OSCI_700007 | ZP_07109069.1 | Oscillatoria sp. | PCC6506 (PCC9029/ATCC29081 /UTEX 1547) | PC | 1 | 197 | 10-19-2011 | |
| CpcS-I subfamily | LYNGBM3L_55940 | ZP_08427741.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 216 | 10-19-2011 | |
| CpcS-I subfamily | MicvaDRAFT_5174 | ZP_08495221.1 | Microcoleus vaginatus | FGP-2 | PC | 1 | 198 | 10-20-2011 | |
| CpcS-I subfamily | IPF_855 | CAO87966.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | 193 | 10-20-2011 | |
| CpcS-I subfamily | NIES39_A02700 | BAI88109.1 | Arthrospira (Spirulina) platensis | NIES-39 | PC | 1 | 197 | 10-20-2011 | |
| CpcS-I subfamily | Cy51472DRAFT_4686 | ZP_08975889.1 | Cyanothece sp. | ATCC51472 | PC | 1 | 198 | 01-10-2012 | |
| CpcS-I subfamily | AplaP_010100006702 | ZP_06381354.1 | Arthrospira (Spirulina) platensis | Paraca | PC | 1 | 197 | 01-24-2012 | |
| CpcS-I subfamily | ACCM5_010100032969 | ZP_09252138.1 | Acaryochloris sp. | CCMEE5410 | APC only | 196 | 08-24-2012 | ||
| CpcS-I subfamily | CWATWH0003_0565 | EHJ14767.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 197 | 02-22-2012 | ||
| CpcS-I subfamily | MICAI_250011 | ZP_10228158.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 193 | 09-16-2012 | |
| CpcS-I subfamily | MICAG_860004 | CCI29527.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 193 | 08-22-2012 | |
| CpcS-I subfamily | MICAB_3830008 | CCH97799.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 193 | 08-23-2012 | |
| CpcS-I subfamily | MICAK_3480004 | CCI37760.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 193 | 08-23-2012 | |
| CpcS-I subfamily | MICAC_4950001 | CCI03754.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 193 | 08-23-2012 | |
| CpcS-I subfamily | MICCA_980010 | ZP_18815604.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 193 | 04-22-2013 | |
| CpcS-I subfamily | MICAD_310004 | CCI08315.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 193 | 08-23-2012 | |
| CpcS-I subfamily | Osc7112_3154 | YP_007115956.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 198 | 04-22-2013 | |
| CpcS-I subfamily | Sta7437_2864 | YP_007133350.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 199 | 04-22-2013 | ||
| CpcS-I subfamily | O53_3911 | ZP_20934710.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 193 | 04-22-2013 | |
| CpcS-I subfamily | Lepto7376_3399 | YP_007072440.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 200 | 04-23-2013 | ||
| CpcS-I subfamily | Cyast_1790 | YP_007165395.1 | Cyanobacterium stanieri | PCC7202 | PC | 196 | 04-23-2013 | ||
| CpcS-I subfamily | Ple7327_2633 | YP_007081472.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 198 | 04-23-2013 | ||
| CpcS-I subfamily | Xen7305DRAFT_00011740 | ZP_21056994.1 | Xenococcus sp. | PCC7305 | PC+PEI | 199 | 04-23-2013 | ||
| CpcS-I subfamily | PCC7418_3218 | YP_007169548.1 | Halothece sp. | PCC7418 | PC | 193 | 04-23-2013 | ||
| CpcS-I subfamily | GLO73106DRAFT_00025640 | ZP_21050308.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 197 | 04-23-2013 | ||
| CpcS-I subfamily | Dacsa_0540 | YP_007170680.1 | Dactylococcopsis salina | PCC8305 | 194 | 04-23-2013 | |||
| CpcS-I subfamily | Pse7367_3816 | YP_007083475.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 208 | 04-23-2013 | ||
| CpcS-I subfamily | Mic7113_2585 | YP_007121784.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 205 | 04-23-2013 | |
| CpcS-I subfamily | ZP_18908102 | ZP_18908102.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 204 | 04-23-2013 | |
| CpcS-I subfamily | Pse7429DRAFT_3448 | ZP_21067785.1 | Pseudanabaena sp. (biceps) | PCC7429 | PC | 200 | 04-24-2013 | ||
| CpcS-I subfamily | Oscil6304_1130 | YP_007084776.1 | Oscillatoria acuminata | PCC6304 (SAG 1449-3) | PC | 203 | 04-29-2013 | ||
| CpcS-I subfamily | Cyan10605_0823 | YP_007160999.1 | Cyanobacterium aponimum | PCC10605 | 194 | 04-29-2013 | |||
| CpcS-I subfamily | Cha6605_1319 | YP_007096040.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 200 | 04-29-2013 | ||
| CpcS-I subfamily | LepboDRAFT_3190 | Leptolyngbya boryana | PCC6306 | PC | 195 | 06-11-2013 | |||
| CpcS-I subfamily | Osc10802DRAFT_6754 | Oscillatoria sp. | PCC10802 | PC+PEI | 204 | 06-12-2013 | |||
| CpcS-I subfamily | Cal6303_1002 | YP_007136039.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 196 | 06-20-2013 | |
| CpcS-I subfamily | Lep6406DRAFT_00042270 | ZP_21044550.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 198 | 06-20-2013 | ||
| CpcS-II subfamily | Syncc9605_2286 | YP_382575.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 197 | 09-26-2011 | |
| CpcS-II subfamily | CPCC7001_2732 | ZP_05046541.1 | Cyanobium sp. | PCC7001 | PC | 1 | 200 | 09-26-2011 | |
| CpcS-II subfamily | Cyagr_1540 | YP_007046040.1 | Cyanobium gracile | PCC6307 | PC | 206 | 04-29-2013 | ||
| CpcS-II subfamily | sync_2487 | YP_731681.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | 203 | 09-26-2011 | |
| CpcS-II subfamily | SH8109_0894 | ZP_05790285.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 197 | 09-26-2011 | |
| CpcS-II subfamily | SYNW0315 | NP_896410.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 198 | 09-26-2011 | |
| CpcS-II subfamily | Syncc9902_0400 | YP_376414.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 198 | 09-26-2011 | |
| CpcS-II subfamily | BL107_17200 | ZP_01468673.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | 198 | 09-26-2011 | |
| CpcS-II subfamily | SynWH7803_2155 | YP_001225878.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | 196 | 09-26-2011 | |
| CpcS-II subfamily | WH7805_11643 | ZP_01122710.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | 196 | 09-26-2011 | |
| CpcS-II subfamily | RS9917_07715 | ZP_01081133.1 | Synechococcus sp. | RS9917 | PC | 1 | 206 | 09-26-2011 | |
| CpcS-II subfamily | RS9916_35312 | ZP_01471093.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | 202 | 09-26-2011 | |
| CpcS-II subfamily | WH5701_15871 | ZP_01084219.1 | Synechococcus sp. | WH5701 | PC | 1 | Frameshifted; join(2811210..2811479,2811479..2811838) | 209 | 09-26-2011 |
| CpcS-II subfamily | SynRCC307_2024 | YP_001228280.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 196 | 09-26-2011 | |
| CpcS-II subfamily | SCB01_010100002463 | ZP_07972490.1 | Synechococcus sp. | CB0101 | PC | 1 | MAACDHRCTRRAA removed at the beginning | 203 | 11-04-2011 |
| CpcS-II subfamily | SCB02_010100000529 | ZP_07969387.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | 201 | 11-04-2011 | |
| CpcS-II subfamily | Syn8016DRAFT_2357 | ZP_08957012.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | 203 | 11-04-2011 | |
| CpcS-II subfamily | PCC_0659 | YP_002049288.1 | Paulinella chromatophora | M0880 | PC | 1 | Protoscan score is not very high, but it matches CpcS-II best | 198 | 08-30-2012 |
| CpcS-II subfamily | SynWH8020_CpcSII | Synechococcus sp. | WH8020 | PC+PEI+PEII | 3dA/CA4-A | From unpublished WH8020 genome | 203 | 08-27-2012 | |
| CpcS-III subfamily | alr0617 | NP_484661.1 | Anabaena (Nostoc) sp. | PCC7120 | PC+PEC | 188 | 09-26-2011 | ||
| CpcS-III subfamily | Ava_4549 | YP_325042.1 | Anabaena variabilis | ATCC29413 (PCC7937) | PC+PEC | 188 | 09-27-2011 | ||
| CpcS-III subfamily | Aazo_1709 | YP_003720981.1 | Anabaena (Nostoc) azollae | 0708 | PC+PEC | 191 | 09-26-2011 | ||
| CpcS-III subfamily | Cyan7425_2083 | YP_002482807.1 | Cyanothece sp. | PCC7425 | PC | 1 | 188 | 09-26-2011 | |
| CpcS-III subfamily | FJSC11DRAFT_1071 | ZP_08984865.1 | Fischerella sp. (Mastigocladus laminosus) | JSC-11 | PC+PEC | 187 | 11-04-2011 | ||
| CpcS-III subfamily | MC7420_7485 | ZP_05023633.1 | Microcoleus chthonoplastes | PCC7420 | PC+PEC | 186 | 09-26-2011 | ||
| CpcS-III subfamily | N9414_02356 | ZP_01632464.1 | Nodularia spumigena | CCY9414 | PC | 1 | 188 | 09-26-2011 | |
| CpcS-III subfamily | CYB_2841 | YP_479027.1 | Synechococcus sp. | JA-2-3B'a(2-13) | PC | 1 | 190 | 09-26-2011 | |
| CpcS-III subfamily | CYA_2807 | YP_476172.1 | Synechococcus sp. | JA-3-3Ab | PC | 1 | 187 | 09-26-2011 | |
| CpcS-III subfamily | tll1699 | NP_682489.1 | Thermosynechococcus elongatus | BP-1 | PC | 1 | 3D structure available (pdb:3BDR). N-term shortened (4 aa removed) | 178 | 08-29-2012 |
| CpcS-III subfamily | CRD_00076 | ZP_06303581.1 | Raphidiopsis brookii | D9 | PC | 1 | Contains a group II intron containing an orf (gi|282895443|ref|ZP_06303580.1|) This sequence is the fusion of CRD_00076 and CRD_00074 (KHEGSTVLVTVPDLLKPGEGKLLRE added before CRD_00074) |
197 | 11-02-2011 |
| CpcS-III subfamily | CRC_02172 | ZP_06308247.1 | Cylindrospermopsis raciborskii | CS-505 | PC | 1 | Fusion of CRC_02170 and CRC_02172. Contains a group II intron (same as D9 strain). KHEGSTVLVTVPDLLKPGEGKLLRE added before CRC_02172 | 197 | 12-02-2011 |
| CpcS-III subfamily | GEI7407_2263 | YP_007109790.1 | Geitlerinema sp. | PCC7407 | PC | 186 | 06-20-2013 | ||
| CpcS-III subfamily | Cri9333_3248 | YP_007143590.1 | Crinalium epipsammum | PCC9333 | PC | 186 | 06-20-2013 | ||
| CpcS-III subfamily | Glo7428_4424 | YP_007130027.1 | Gloeocapsa sp. | PCC7428 | PC | 187 | 04-22-2013 | ||
| CpcS-III subfamily | Syn7509DRAFT_00025220 | ZP_21040972.1 | Synechocystis sp. | PCC7509 | PC | 185 | 04-22-2013 | ||
| CpcS-III subfamily | Anacy_0109 | YP_007154628.1 | Anabaena cylindrica | PCC7122 | PC+PEC | 190 | 04-23-2013 | ||
| CpcS-III subfamily | Cylst_0830 | YP_007145836.1 | Cylindrospermum stagnale | PCC7417 | PC+PEC | 191 | 04-23-2013 | ||
| CpcS-III subfamily | Nos7524_3943 | YP_007077313.1 | Nostoc sp. | PCC7524 | PC+PEC | 187 | 04-23-2013 | ||
| CpcS-III subfamily | Riv7116_2426 | YP_007055488.1 | Rivularia sp. | PCC7116 | PC+PEC | 188 | 04-23-2013 | ||
| CpcS-III subfamily | Chro_1676 | YP_007091064.1 | Chroococcidiopsis thermalis | PCC7203 | PC+PEC | 186 | 04-23-2013 | ||
| CpcS-III subfamily | Nos7107_3741 | YP_007051452.1 | Nostoc sp. | PCC7107 | PC+PEC | 187 | 04-29-2013 | ||
| CpcS-III subfamily | Cal7507_3605 | YP_007066831.1 | Calothrix sp. | PCC7507 | PC+PEC | 188 | 04-29-2013 | ||
| CpcS-III subfamily | Fis9431DRAFT_3727 | Fischerella sp. | PCC9431 | PC+PEC | 187 | 06-12-2013 | |||
| CpcS-III subfamily | FIS9605DRAFT_06979 | Fischerella sp. | PCC9605 | PC+PEC | 188 | 06-12-2013 | |||
| CpcS-III subfamily | FisPCC73103_3408 | Fischerella muscicola | PCC73103 (SAG 1427-1) | PC+PEC | 187 | 06-12-2013 | |||
| CpcS-III subfamily | Scytonema_PCC7110_joined_11887 | Scytonema hofmanni | PCC7110 | PC+PEC | 189 | 06-12-2013 | |||
| CpcS-III subfamily | PCC9339DRAFT_01730 | Fischerella sp. | PCC9339 | PC+PEC | 187 | 06-12-2013 | |||
| CpcS-III subfamily | Ana7108_2980 | Anabaena sp. | PCC7108 | PC+PEC | 191 | 06-12-2013 | |||
| CpcS-III subfamily | Chloroglopsis_PCC9212_joined_7598 | Chlorogloeopsis sp. | PCC9212 | PC+PEC | 189 | 06-12-2013 | |||
| CpcS-III subfamily | UYC_05286 | Chlorogloeopsis fritschii | PCC6912 | PC+PEC | 189 | 06-12-2013 | |||
| CpcS-III subfamily | FisPCC7414_4393 | Fischerella muscicola | PCC7414 | PC+PEC | 187 | 06-12-2013 | |||
| CpcS-III subfamily | Fischerella_sp._PCC7521_3615 | Fischerella thermalis | PCC7521 | PC+PEC | 187 | 06-12-2013 | |||
| CpcS-III subfamily | Syn6312_0613 | YP_007060377.1 | Synechococcus sp. | PCC6312 | PC | 186 | 06-12-2013 | ||
| CpcS-III subfamily | Syn7502_02665 | YP_007106758.1 | Synechococcus sp. | PCC7502 | PC | 172 | 06-20-2013 | ||
| CpcS-III subfamily | Mic7113_0798 | YP_007120112.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | Found both CpcS-I and CpcS-III in this strain? | 188 | 06-20-2013 |
| CpcU-I subfamily | AmaxDRAFT_1245 | ZP_03272427.1 | Arthrospira (Spirulina) maxima | CS-328 | PC | 1 | Fairly low blast score to other CpcU-I sequences. | 172 | 09-16-2012 |
| CpcU-I subfamily | CwatDRAFT_4215 | ZP_00515818.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 175 | 09-26-2011 | ||
| CpcU-I subfamily | cce_3775 | YP_001805189.1 | Cyanothece sp. | ATCC51142 | PC | 1 | N-term shortened (2 aa removed: MF) | 175 | 09-16-2012 |
| CpcU-I subfamily | PCC7424_0571 | YP_002375901.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 172 | 09-26-2011 | |
| CpcU-I subfamily | PCC8801_1382 | YP_002371598.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 176 | 09-26-2011 | |
| CpcU-I subfamily | Cyan8802_1416 | YP_003137168.1 | Cyanothece sp. | PCC8802 | PC | 1 | 176 | 09-26-2011 | |
| CpcU-I subfamily | CY0110_18677 | ZP_01727104.1 | Cyanothece sp. | CCY0110 | PC | 1 | 175 | 09-26-2011 | |
| CpcU-I subfamily | Cyan7822_1691 | YP_003886955.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 172 | 09-26-2011 | |
| CpcU-I subfamily | GL6909_0312 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 172 | 05-31-2011 | ||
| CpcU-I subfamily | L8106_16679 | ZP_01620367.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | 176 | 09-26-2011 | |
| CpcU-I subfamily | MAE_56790 | YP_001660693.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | 170 | 09-26-2011 | |
| CpcU-I subfamily | Npun_R1154 | YP_001864823.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 188 | 09-26-2011 | |
| CpcU-I subfamily | Tery_3198 | YP_722794.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | 174 | 09-26-2011 | ||
| CpcU-I subfamily | OSCI_1150017 | ZP_07109767.1 | Oscillatoria sp. | PCC6506 (PCC9029/ATCC29081 /UTEX 1547) | PC | 1 | 192 | 10-19-2011 | |
| CpcU-I subfamily | LYNGBM3L_17960 | ZP_08426426.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | Protomata tells it is CpcU. Blast tells it is CpcSIII (but with a 17aa gap) |
190 | 10-19-2011 |
| CpcU-I subfamily | MicvaDRAFT_5310 | ZP_08492814.1 | Microcoleus vaginatus | FGP-2 | PC | 1 | 169 | 10-20-2011 | |
| CpcU-I subfamily | IPF_3445 | CAO90549.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | 171 | 10-20-2011 | |
| CpcU-I subfamily | NIES39_R01090 | BAI94418.1 | Arthrospira (Spirulina) platensis | NIES-39 | PC | 1 | 174 | 10-20-2011 | |
| CpcU-I subfamily | Cy51472DRAFT_2075 | ZP_08973279.1 | Cyanothece sp. | ATCC51472 | PC | 1 | 175 | 01-10-2012 | |
| CpcU-I subfamily | AplaP_010100016770 | ZP_06383329.1 | Arthrospira (Spirulina) platensis | Paraca | PC | 1 | 174 | 01-24-2012 | |
| CpcU-I subfamily | ACCM5_010100021921 | ZP_09249963.1 | Acaryochloris sp. | CCMEE5410 | APC only | 184 | 01-24-2012 | ||
| CpcU-I subfamily | CWATWH0003_2252 | EHJ13063.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 175 | 02-22-2012 | ||
| CpcU-I subfamily | MICAI_560047 | ZP_10229859.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 170 | 08-22-2012 | |
| CpcU-I subfamily | MICAG_930008 | CCI29657.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 170 | 08-22-2012 | |
| CpcU-I subfamily | MICAB_5520008 | CCH98898.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 170 | 08-23-2012 | |
| CpcU-I subfamily | MICAK_3340003 | CCI37521.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 170 | 08-23-2012 | |
| CpcU-I subfamily | MICAC_1120009 | CCI00723.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 171 | 08-23-2012 | |
| CpcU-I subfamily | MICAD_2540005 | CCI07478.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 170 | 08-23-2012 | |
| CpcU-I subfamily | O53_764 | ZP_20931601.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 170 | 04-22-2013 | |
| CpcU-I subfamily | Osc7112_0647 | YP_007113656.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 169 | 04-22-2013 | |
| CpcU-I subfamily | Oscil6304_5543 | YP_007088946.1 | Oscillatoria acuminata | PCC6304 (SAG 1449-3) | PC | 177 | 04-22-2013 | ||
| CpcU-I subfamily | MICCA_1100007 | ZP_18815797.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 170 | 04-29-2013 | |
| CpcU-I subfamily | Xen7305DRAFT_00032080 | ZP_21054973.1 | Xenococcus sp. | PCC7305 | PC+PEI | 177 | 04-29-2013 | ||
| CpcU-I subfamily | Osc10802DRAFT_5465 | Oscillatoria sp. | PCC10802 | PC+PEI | N-term shortened (44 aa) | 185 | 07-02-2013 | ||
| CpcU-I subfamily | Cha6605_3988 | YP_007098477.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 183 | 06-20-2013 | ||
| CpcU-I subfamily | Sta7437_1181 | YP_007131718.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 186 | 06-20-2013 | ||
| CpcU-I subfamily | Cal6303_1972 | YP_007136977.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 176 | 06-20-2013 | |
| CpcU-I subfamily | Lepto7376_2440 | YP_007071553.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 183 | 06-20-2013 | ||
| CpcU-I subfamily | Pse7367_2638 | YP_007103322.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 178 | 06-20-2013 | ||
| CpcU-I subfamily | Lep6406DRAFT_00043770 | ZP_21044403.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 173 | 06-20-2013 | ||
| CpcU-I subfamily | GLO73106DRAFT_00011320 | ZP_21051667.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 174 | 06-20-2013 | ||
| CpcU-I subfamily | Cyast_0213 | YP_007163844.1 | Cyanobacterium stanieri | PCC7202 | PC | 173 | 06-20-2013 | ||
| CpcU-I subfamily | Cyan10605_0119 | YP_007160321.1 | Cyanobacterium aponimum | PCC10605 | 182 | 06-20-2013 | |||
| CpcU-I subfamily | Lepto7375DRAFT_4641 | ZP_18909026.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 169 | 06-20-2013 | |
| CpcU-I subfamily | PCC7418_3771 | YP_007170089.1 | Halothece sp. | PCC7418 | PC | 179 | 06-20-2013 | ||
| CpcU-I subfamily | Dacsa_0519 | YP_007170660.1 | Dactylococcopsis salina | PCC8305 | 190 | 06-20-2013 | |||
| CpcU-I subfamily | SYNPCC7002_A2053 | YP_001735295.1 | Synechococcus sp. | PCC7002 | PC | 1 | 183 | 09-26-2011 | |
| CpcU-I subfamily | Sll0853 | NP_441116.1 | Synechocystis sp. | PCC6803 (ATCC27184) | PC | 1 | N-term shortened (11 aa removed: MKPVAPRSFFA) | 175 | 09-16-2012 |
| CpcU-I subfamily | glr1614 | NP_924560.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 212 | 09-26-2011 | |
| CpcU-I subfamily | Synpcc7942_0161 | YP_399180.1 | Synechococcus elongatus | PCC7942 | PC | 1 | N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. | 180 | 09-16-2012 |
| CpcU-I subfamily | syc1345_c | YP_172055.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. | 180 | 09-16-2012 |
| CpcU-I subfamily | AM1_5938 | YP_001520196.1 | Acaryochloris marina | MBIC11017 (AM1) | PC | 1 | N-term extended (22 aa added). Low blast and protomatch score with other CpcU-I sequences. | 184 | 09-16-2012 |
| CpcU-II subfamily | PCC_0138 | YP_002048800.1 | Paulinella chromatophora | M0880 | PC | 1 | 157 | 09-16-2012 | |
| CpcU-II subfamily | BL107_11196 | ZP_01469616.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | 154 | 11-04-2011 | |
| CpcU-II subfamily | sync_0774 | YP_729988.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | 158 | 11-04-2011 | |
| CpcU-II subfamily | Syncc9605_0889 | YP_381212.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 153 | 11-04-2011 | |
| CpcU-II subfamily | Syncc9902_1509 | YP_377511.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 154 | 11-04-2011 | |
| CpcU-II subfamily | SynRCC307_1726 | YP_001227982.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 151 | 11-04-2011 | |
| CpcU-II subfamily | RS9917_01916 | ZP_01081335.1 | Synechococcus sp. | RS9917 | PC | 1 | 156 | 11-04-2011 | |
| CpcU-II subfamily | WH5701_14506 | ZP_01083946.1 | Synechococcus sp. | WH5701 | PC | 1 | 162 | 11-04-2011 | |
| CpcU-II subfamily | SynWH7803_1725 | YP_001225448.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | 153 | 11-04-2011 | |
| CpcU-II subfamily | RS9916_33072 | ZP_01470645.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | N-term possibly 12 aa too long | 169 | 09-16-2012 |
| CpcU-II subfamily | WH7805_05516 | ZP_01124634.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | N-term shortened (7 aa removed: MSCEDGS) | 153 | 09-16-2012 |
| CpcU-II subfamily | SYNW1611 | NP_897704.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 154 | 11-04-2011 | |
| CpcU-II subfamily | Syn8016DRAFT_2448 | ZP_08957102.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | 158 | 12-02-2011 | |
| CpcU-II subfamily | SH8109_1400 | ZP_05790078.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 153 | 12-02-2011 | |
| CpcU-II subfamily | SCB02_010100006257 | ZP_07970508.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | 154 | 12-02-2011 | |
| CpcU-II subfamily | SCB01_010100010455 | ZP_07974079.1 | Synechococcus sp. | CB0101 | PC | 1 | 161 | 12-02-2011 | |
| CpcU-II subfamily | CPCC7001_xx | Cyanobium sp. | PCC7001 | PC | 1 | Found using tblastn. Orf not detected in refseq. | 166 | 02-21-2012 | |
| CpcU-II subfamily | Cyagr_1229 | YP_007045748.1 | Cyanobium gracile | PCC6307 | PC | 177 | 04-29-2013 | ||
| CpeS-I subfamily | S7335_2433 | ZP_05036001.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 176 | 09-26-2011 | |
| CpeS-I subfamily | CwatDRAFT_5719 | ZP_00514726.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 179 | 09-26-2011 | ||
| CpeS-I subfamily | PCC7424_5723 | YP_002381018.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 177 | 09-26-2011 | |
| CpeS-I subfamily | PCC8801_4527 | YP_002364804.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpeS-I subfamily | Cyan7822_4033 | YP_003889233.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 177 | 09-26-2011 | |
| CpeS-I subfamily | gi|145967347|gb|ABP99029.1| | ABP99029.1 | Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) | Fd33 (UTEX481/PCC7601) | PC+PEI | CA3 | N-term shortened (6 aa removed: METKVL). C-term much longer than in other CpeS-I sequences and also includes a specific sequence at between aa 103-112. | 215 | 09-17-2012 |
| CpeS-I subfamily | gvip162 | NP_924138.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 180 | 11-24-2011 | |
| CpeS-I subfamily | GL6909_3548 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 179 | 05-31-2011 | ||
| CpeS-I subfamily | Npun_F0737 | YP_001864432.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 178 | 09-26-2011 | |
| CpeS-I subfamily | Tery_4106 | YP_723587.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | 173 | 09-26-2011 | ||
| CpeS-I subfamily | LYNGBM3L_16710 | ZP_08428242.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 178 | 10-19-2011 | |
| CpeS-I subfamily | OSCI_1700002 | ZP_07110201.1 | Oscillatoria sp. | PCC6506 (PCC9029/ATCC29081 /UTEX 1547) | PC | 1 | N-term shortened (2 aa removed: MP) | 177 | 09-16-2012 |
| CpeS-I subfamily | CWATWH0003_1105 | EHJ14216.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 179 | 02-22-2012 | ||
| CpeS-I subfamily | MICAI_380005 | ZP_10229442.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 177 | 08-22-2012 | |
| CpeS-I subfamily | Osc7112_1030 | YP_007114004.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 181 | 04-24-2013 | |
| CpeS-I subfamily | Ple7327_0106 | YP_007079149.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 178 | 04-24-2013 | ||
| CpeS-I subfamily | Mic7113_4756 | YP_007123835.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 175 | 04-24-2013 | |
| CpeS-I subfamily | Pse7367_3898 | YP_007083553.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 183 | 04-24-2013 | ||
| CpeS-I subfamily | GLO73106DRAFT_00012580 | ZP_21051594.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 176 | 04-24-2013 | ||
| CpeS-I subfamily | Xen7305DRAFT_00019040 | ZP_21056252.1 | Xenococcus sp. | PCC7305 | PC+PEI | 181 | 04-24-2013 | ||
| CpeS-I subfamily | Lepto7376_0477 | YP_007069743.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 177 | 04-24-2013 | ||
| CpeS-I subfamily | ZP_18907660 | ZP_18907660.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 175 | 04-24-2013 | |
| CpeS-I subfamily | Cal6303_1334 | YP_007136366.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 180 | 04-29-2013 | |
| CpeS-I subfamily | Sta7437_0960 | YP_007131508.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 179 | 04-29-2013 | ||
| CpeS-I subfamily | Cha6605_4067 | YP_007098550.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 178 | 04-29-2013 | ||
| CpeS-I subfamily | Osc10802DRAFT_5368 | Oscillatoria sp. | PCC10802 | PC+PEI | 194 | 06-12-2013 | |||
| CpeS-I subfamily | Pse7429DRAFT_1237 | ZP_21065324.1 | Pseudanabaena sp. (biceps) | PCC7429 | PC | 180 | 06-20-2013 | ||
| CpeS-II subfamily | sync_0510 | YP_729737.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | 179 | 09-26-2011 | |
| CpeS-II subfamily | Syncc9605_0441 | YP_380772.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 180 | 09-26-2011 | |
| CpeS-II subfamily | SH8109_0064 | ZP_05789382.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 180 | 09-26-2011 | |
| CpeS-II subfamily | SYNW2002 | NP_898093.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 180 | 09-26-2011 | |
| CpeS-II subfamily | Syncc9902_1886 | YP_377887.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 178 | 09-26-2011 | |
| CpeS-II subfamily | BL107_08991 | ZP_01469901.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | 178 | 09-26-2011 | |
| CpeS-II subfamily | SynWH7803_0499 | YP_001224222.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | 178 | 09-26-2011 | |
| CpeS-II subfamily | WH7805_06671 | ZP_01123334.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | 178 | 09-26-2011 | |
| CpeS-II subfamily | RS9916_40271 | ZP_01473097.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | 178 | 09-26-2011 | |
| CpeS-II subfamily | SynRCC307_2041 | YP_001228297.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 177 | 09-26-2011 | |
| CpeS-II subfamily | SCB02_010100004283 | ZP_07970126.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | 177 | 11-04-2011 | |
| CpeS-II subfamily | Syn8016DRAFT_2761 | ZP_08957414.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | 179 | 11-04-2011 | |
| CpeS-II subfamily | NATL1_03911 | YP_001014220.1 | Prochlorococcus marinus | NATL1A | PEIII | high b/a | N-term extended (16 aa added) | 177 | 08-28-2012 |
| CpeS-II subfamily | PMN2A_1677 | YP_292868.1 | Prochlorococcus marinus | NATL2A | PEIII | high b/a | 177 | 11-25-2011 | |
| CpeS-II subfamily | Pro0343 | NP_874737.1 | Prochlorococcus marinus | SS120 (CCMP1375) | PEIII | high b/a | 181 | 11-25-2011 | |
| CpeS-II subfamily | P9211_03381 | YP_001550223.1 | Prochlorococcus marinus | MIT9211 | PEIII | High b/a | 178 | 11-25-2011 | |
| CpeS-II subfamily | P9303_22301 | YP_001018230.1 | Prochlorococcus sp. | MIT9303 | PEIII | high b/a | N-term extended: MNIEQFVDQSEGTWRS added by FP | 177 | 09-26-2011 |
| CpeS-II subfamily | PMT1677 | NP_895504.1 | Prochlorococcus sp. | MIT9313 | PEIII | high b/a | 177 | 09-26-2011 | |
| CpeS-II subfamily | SynWH8020_CpeSII | Synechococcus sp. | WH8020 | PC+PEI+PEII | 3dA/CA4-A | From unpublished WH8020 genome | 179 | 08-27-2012 | |
| CpeS-ProHL subfamily | PMM0306 | NP_892425.1 | Prochlorococcus marinus | MED4 (CCMP1986/CCMP1378) | beta-PEIII | low b/a | 183 | 09-26-2011 | |
| CpeS-ProHL subfamily | P9515_03401 | YP_001010656.1 | Prochlorococcus marinus | MIT9515 | beta-PEIII | low b/a | 183 | 09-26-2011 | |
| CpeS-ProHL subfamily | P9301_03311 | YP_001090555.1 | Prochlorococcus marinus | MIT9301 | beta-PEIII | low b/a | 182 | 09-26-2011 | |
| CpeS-ProHL subfamily | A9601_03301 | YP_001008725.1 | Prochlorococcus marinus | AS9601 | beta-PEIII | low b/a | 183 | 09-26-2011 | |
| CpeS-ProHL subfamily | P9215_03311 | YP_001483534.1 | Prochlorococcus marinus | MIT9215 | beta-PEIII | low b/a | 183 | 09-26-2011 | |
| CpeS-ProHL subfamily | PMT9312_0308 | YP_396805.1 | Prochlorococcus marinus | MIT9312 | beta-PEIII | low b/a | 183 | 09-26-2011 | |
| CpeS-ProHL subfamily | PUH18301_0334 | Prochlorococcus marinus | UH18301 | beta-PEIII | low b/a | 183 | 05-31-2011 | ||
| CpeS-ProHL subfamily | P9202_xx | Prochlorococcus marinus | MIT9202 | beta-PEIII | low b/a | Not in Refseq, found with tblastn in JCVI sequence | 183 | 02-21-2012 | |
| CpeU-I subfamily | S7335_5494 | ZP_05039049.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 185 | 11-25-2011 | |
| CpeU-I subfamily | PCC7424_5736 | YP_002381031.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 197 | 11-25-2011 | |
| CpeU-I subfamily | PCC8801_4521 | YP_002364799.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 194 | 11-25-2011 | |
| CpeU-I subfamily | Cyan7822_4040 | YP_003889240.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 196 | 11-25-2011 | |
| CpeU-I subfamily | glr1259 | NP_924205.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 197 | 11-25-2011 | |
| CpeU-I subfamily | GL6909_3539 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 190 | 11-25-2011 | ||
| CpeU-I subfamily | Npun_R0731 | YP_001864426.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 191 | 11-25-2011 | |
| CpeU-I subfamily | Tery_4111 | YP_723592.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | 193 | 11-25-2011 | ||
| CpeU-I subfamily | LYNGBM3L_55920 | ZP_08427738.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 197 | 11-25-2011 | |
| CpeU-I subfamily | AAQ63051 | AAQ63051.1 | Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) | Fd33 (UTEX481/PCC7601) | PC+PEI | CA3 | orf2 in pebAB operon. N-term shortened (14 aa removed: MKCEVSSHFIRGAV) | 195 | 09-16-2012 |
| CpeU-I subfamily | MICAI_380008 | ZP_10229445.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 196 | 08-22-2012 | |
| CpeU-I subfamily | Ple7327_2703 | YP_007081540.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 176 | 04-22-2013 | ||
| CpeU-I subfamily | GLO73106DRAFT_00035880 | ZP_21049296.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 181 | 04-24-2013 | ||
| CpeU-I subfamily | Ple7327_1060 | YP_007080032.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 195 | 04-24-2013 | ||
| CpeU-I subfamily | Mic7113_4742 | YP_007123821.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 204 | 04-24-2013 | |
| CpeU-I subfamily | Lepto7376_3000 | YP_007072075.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 191 | 04-24-2013 | ||
| CpeU-I subfamily | ZP_18907671 | ZP_18907671.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 196 | 04-24-2013 | |
| CpeU-I subfamily | Cha6605_4060 | YP_007098543.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 186 | 04-29-2013 | ||
| CpeU-I subfamily | Sta7437_0247 | YP_007130830.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 187 | 04-29-2013 | ||
| CpeU-I subfamily | Cal6303_1003 | YP_007136040.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 202 | 04-29-2013 | |
| CpeU-I subfamily | Xen7305DRAFT_00018880 | ZP_21056337.1 | Xenococcus sp. | PCC7305 | PC+PEI | 187 | 04-29-2013 | ||
| CpeU-I subfamily | Osc7112_1019 | YP_007113993.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 196 | 04-29-2013 | |
| CpeU-I subfamily | Pse7367_3939 | YP_007083590.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 197 | 04-29-2013 | ||
| CpeU-I subfamily | Osc10802DRAFT_3769 | Oscillatoria sp. | PCC10802 | PC+PEI | 198 | 06-12-2013 | |||
| CpeU-II subfamily | sync_0492 | YP_729719.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | 200 | 11-25-2011 | |
| CpeU-II subfamily | Syncc9605_0424 | YP_380755.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 203 | 11-25-2011 | |
| CpeU-II subfamily | SH8109_0086 | ZP_05788514.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 203 | 11-25-2011 | |
| CpeU-II subfamily | SYNW2019 | NP_898110.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 204 | 11-25-2011 | |
| CpeU-II subfamily | Syncc9902_1905 | YP_377906.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 205 | 11-25-2011 | |
| CpeU-II subfamily | BL107_08896 | ZP_01469882.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | N-term extended (8 aa added) | 205 | 09-17-2012 |
| CpeU-II subfamily | SynWH7803_0483 | YP_001224206.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | possible alternative start would make the sequence 2 aa longer (MP) | 201 | 09-17-2012 |
| CpeU-II subfamily | WH7805_06731 | ZP_01123346.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | N-term extended (8 aa added) | 193 | 09-17-2012 |
| CpeU-II subfamily | SynRCC307_2060 | YP_001228316.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 202 | 11-25-2011 | |
| CpeU-II subfamily | SCB02_010100004388 | ZP_07970147.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | MIVEASFVVPMS not present in refseq | 206 | 11-25-2011 |
| CpeU-II subfamily | Syn8016DRAFT_2746 | ZP_08957399.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | N-term shortened by 22aa (METVPTFQSNGPMTVSDSSLEV) | 204 | 11-25-2011 |
| CpeU-II subfamily | RS9916_40166 | ZP_01473076.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | N-term extended (10 aa added) | 208 | 09-17-2012 |
| CpeU-II subfamily | SynWH8020_CpeUII | AAA27342.1 | Synechococcus sp. | WH8020 | PC+PEI+PEII | 3dA/CA4-A | ORF200 in Wilbanks et al. (1993) | 200 | 08-27-2012 |
| CpcS homologs family | L8106_04191 | ZP_01624610.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | N-term shortened (13 aa removed) | 187 | 08-29-2012 |
| CpcS homologs family | LYNGBM3L_16700 | ZP_08428241.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 183 | 11-16-2011 | |
| CpcS homologs family | Cyan7822_0350 | YP_003885671.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 184 | 11-16-2011 | |
| CpcS homologs family | PCC7424_4989 | YP_002380210.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 186 | 11-16-2011 | |
| CpcS homologs family | IPF_1433 | CAO88463.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | N-term shortened (6 aa removed) | 184 | 08-29-2012 |
| CpcS homologs family | MAE_03120 | YP_001655326.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | 184 | 11-16-2011 | |
| CpcS homologs family | Synpcc7942_1167 | YP_400184.1 | Synechococcus elongatus | PCC7942 | PC | 1 | 185 | 11-16-2011 | |
| CpcS homologs family | syc0383_d | YP_171093.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 185 | 11-16-2011 | |
| CpcS homologs family | CYB_1626 | YP_477850.1 | Synechococcus sp. | JA-2-3B'a(2-13) | PC | 1 | 184 | 11-16-2011 | |
| CpcS homologs family | S7335_2999 | ZP_05036565.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 190 | 11-16-2011 | |
| CpcS homologs family | CYA_1794 | YP_475210.1 | Synechococcus sp. | JA-3-3Ab | PC | 1 | 184 | 11-16-2011 | |
| CpcS homologs family | gll1024 | NP_923970.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | N-term shortened (10 aa removed) | 185 | 08-29-2012 |
| CpcS homologs family | GL6909_1261 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 184 | 11-29-2011 | ||
| CpcS homologs family | MICAI_1950011 | ZP_10227308.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 184 | 08-22-2012 | |
| CpcS homologs family | MICAG_1770025 | CCI22489.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 184 | 08-22-2012 | |
| CpcS homologs family | MICAB_3150024 | CCH97313.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 184 | 08-23-2012 | |
| CpcS homologs family | MICAK_4060002 | CCI38357.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 184 | 08-23-2012 | |
| CpcS homologs family | MICAC_5390009 | CCI04105.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 184 | 08-23-2012 | |
| CpcS homologs family | MICAD_1550046 | CCI06176.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 184 | 08-23-2012 | |
| CpcS homologs family | ZP_20934102 | ZP_20934102.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 184 | 04-24-2013 | |
| CpcS homologs family | Ple7327_3413 | YP_007082178.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 184 | 04-24-2013 | ||
| CpcS homologs family | ZP_18907916 | ZP_18907916.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 185 | 04-24-2013 | |
| CpcS homologs family | PCC7418_3216 | YP_007169546.1 | Halothece sp. | PCC7418 | PC | 186 | 04-24-2013 | ||
| CpcS homologs family | Dacsa_0538 | YP_007170678.1 | Dactylococcopsis salina | PCC8305 | 186 | 04-24-2013 | |||
| CpcS homologs family | Pse7367_3944 | YP_007083595.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | N-term shortened (9 aa) | 193 | 07-02-2013 | |
| CpcS homologs family | GLO73106DRAFT_00038250 | ZP_21049050.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 185 | 04-24-2013 | ||
| CpcS homologs family | MICCA_3330013 | ZP_18818132.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 184 | 04-29-2013 | |
| CpcS homologs family | Sta7437_0955 | YP_007131503.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 184 | 04-29-2013 | ||
| CpcS homologs family | Lep6406DRAFT_00020640 | ZP_21046657.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 186 | 04-29-2013 | ||
| CpcS homologs family | Osc10802DRAFT_5364 | Oscillatoria sp. | PCC10802 | PC+PEI | 184 | 06-12-2013 | |||
| CpcV family | S7335_3639 | ZP_05037201.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 203 | 09-26-2011 | |
| CpcV family | All5292 | NP_489332.1 | Anabaena (Nostoc) sp. | PCC7120 | PC+PEC | 180 | 09-26-2011 | ||
| CpcV family | Ava_2542 | YP_323052.1 | Anabaena variabilis | ATCC29413 (PCC7937) | PC+PEC | 178 | 09-27-2011 | ||
| CpcV family | Aazo_1048 | YP_003720533.1 | Anabaena (Nostoc) azollae | 0708 | PC+PEC | 186 | 09-26-2011 | ||
| CpcV family | PCC7424_0543 | YP_002375874.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpcV family | PCC8801_0182 | YP_002370442.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 180 | 09-26-2011 | |
| CpcV family | Cyan8802_0177 | YP_003135981.1 | Cyanothece sp. | PCC8802 | PC | 1 | 180 | 09-26-2011 | |
| CpcV family | Cyan7822_3176 | YP_003888405.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpcV family | GL6909_1397 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 179 | 05-31-2011 | ||
| CpcV family | L8106_20770 | ZP_01622676.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | 179 | 09-26-2011 | |
| CpcV family | MAE_43410 | YP_001659355.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | 179 | 09-26-2011 | |
| CpcV family | N9414_09601 | ZP_01632591.1 | Nodularia spumigena | CCY9414 | PC | 1 | 180 | 09-26-2011 | |
| CpcV family | Npun_R5841 | YP_001869082.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 180 | 09-26-2011 | |
| CpcV family | Synpcc7942_0364 | YP_399383.1 | Synechococcus elongatus | PCC7942 | PC | 1 | 183 | 09-26-2011 | |
| CpcV family | syc1149_c | YP_171859.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 183 | 09-26-2011 | |
| CpcV family | CRD_01019 | ZP_06304158.1 | Raphidiopsis brookii | D9 | PC | 1 | 178 | 10-19-2011 | |
| CpcV family | CRC_02537 | ZP_06309054.1 | Cylindrospermopsis raciborskii | CS-505 | PC | 1 | 178 | 10-19-2011 | |
| CpcV family | IPF_3889 | CAO91269.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | 179 | 10-20-2011 | |
| CpcV family | MICAI_660015 | ZP_10230065.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 179 | 08-22-2012 | |
| CpcV family | MICAG_130027 | CCI21366.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 179 | 08-22-2012 | |
| CpcV family | MICAB_580007 | CCH99120.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAK_2740002 | CCI36804.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAC_6140009 | CCI04940.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAD_2990036 | CCI08086.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | Nos7524_2791 | YP_007076213.1 | Nostoc sp. | PCC7524 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Syn7509DRAFT_00027440 | ZP_21040864.1 | Synechocystis sp. | PCC7509 | PC | 185 | 04-23-2013 | ||
| CpcV family | Anacy_2625 | YP_007156976.1 | Anabaena cylindrica | PCC7122 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Cylst_5166 | YP_007149887.1 | Cylindrospermum stagnale | PCC7417 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Mic7113_6350 | YP_007125343.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 181 | 04-23-2013 | |
| CpcV family | ZP_20934830 | ZP_20934830.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 179 | 04-23-2013 | |
| CpcV family | Glo7428_0828 | YP_007126571.1 | Gloeocapsa sp. | PCC7428 | PC | 179 | 04-23-2013 | ||
| CpcV family | Chro_2758 | YP_007092096.1 | Chroococcidiopsis thermalis | PCC7203 | PC+PEC | 182 | 04-23-2013 | ||
| CpcV family | Dacsa_3059 | YP_007172949.1 | Dactylococcopsis salina | PCC8305 | 178 | 04-23-2013 | |||
| CpcV family | Ple7327_1943 | YP_007080842.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | N-term shortened (12 aa) | 179 | 07-02-2013 | |
| CpcV family | GLO73106DRAFT_00007680 | ZP_21052075.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 176 | 04-23-2013 | ||
| CpcV family | Pse7367_3862 | YP_007083521.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 201 | 04-23-2013 | ||
| CpcV family | SYNPCC7002_A2772 | YP_001736001.1 | Synechococcus sp. | PCC7002 | PC | 1 | Possible alternative start which would make sequence 28 aa shorter (MPCPGLQENVTIYKLSIDICRSSRSSSP) | 202 | 09-26-2011 |
| CpcV family | FJSC11DRAFT_2876 | ZP_08986670.1 | Fischerella sp. (Mastigocladus laminosus) | JSC-11 | PC+PEC | 178 | 11-04-2011 | ||
| CpcV family | gll1531 | NP_924477.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 174 | 09-26-2011 | |
| CpcV family | PCC7418_0245 | YP_007166696.1 | Halothece sp. | PCC7418 | PC | 178 | 04-23-2013 | ||
| CpcV family | Xen7305DRAFT_00016660 | ZP_21056473.1 | Xenococcus sp. | PCC7305 | PC+PEI | 181 | 04-23-2013 | ||
| CpcV family | ZP_18907669 | ZP_18907669.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 177 | 04-23-2013 | |
| CpcV family | Lepto7376_3174 | YP_007072237.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 176 | 04-23-2013 | ||
| CpcV family | Riv7116_0828 | YP_007053959.1 | Rivularia sp. | PCC7116 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | GEI7407_3497 | YP_007111016.1 | Geitlerinema sp. | PCC7407 | PC | 179 | 04-29-2013 | ||
| CpcV family | Nos7107_4105 | YP_007051806.1 | Nostoc sp. | PCC7107 | PC+PEC | 179 | 04-29-2013 | ||
| CpcV family | MICCA_960048 | ZP_18815548.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 179 | 04-29-2013 | |
| CpcV family | Cal7507_0808 | YP_007064126.1 | Calothrix sp. | PCC7507 | PC+PEC | 180 | 04-29-2013 | ||
| CpcV family | Cha6605_0407 | YP_007095229.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 182 | 04-29-2013 | ||
| CpcV family | Oscil6304_1493 | YP_007085118.1 | Oscillatoria acuminata | PCC6304 (SAG 1449-3) | PC | 179 | 04-29-2013 | ||
| CpcV family | Sta7437_3035 | YP_007133519.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 180 | 04-29-2013 | ||
| CpcV family | Cal6303_4023 | YP_007138911.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 180 | 04-29-2013 | |
| CpcV family | Lep6406DRAFT_00020650 | ZP_21046658.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 178 | 04-29-2013 | ||
| CpcV family | LepboDRAFT_0977 | Leptolyngbya boryana | PCC6306 | PC | 179 | 06-11-2013 | |||
| CpcV family | Fis9431DRAFT_0656 | Fischerella sp. | PCC9431 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | FIS9605DRAFT_06446 | Fischerella sp. | PCC9605 | PC+PEC | 176 | 06-12-2013 | |||
| CpcV family | FisPCC73103_2832 | Fischerella muscicola | PCC73103 (SAG 1427-1) | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Scytonema_PCC7110_joined_9349 | Scytonema hofmanni | PCC7110 | PC+PEC | 190 | 06-12-2013 | |||
| CpcV family | Osc10802DRAFT_3493 | Oscillatoria sp. | PCC10802 | PC+PEI | 178 | 06-12-2013 | |||
| CpcV family | PCC9339DRAFT_05124 | Fischerella sp. | PCC9339 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Ana7108_1911 | Anabaena sp. | PCC7108 | PC+PEC | 180 | 06-12-2013 | |||
| CpcV family | Chloroglopsis_PCC9212_joined_3827 | Chlorogloeopsis sp. | PCC9212 | PC+PEC | 196 | 06-12-2013 | |||
| CpcV family | UYC_07367 | Chlorogloeopsis fritschii | PCC6912 | PC+PEC | 196 | 06-12-2013 | |||
| CpcV family | FisPCC7414_2733 | Fischerella muscicola | PCC7414 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Fischerella_sp._PCC7521_3976 | Fischerella thermalis | PCC7521 | PC+PEC | 178 | 06-12-2013 |
Model strains, Marine strains
Last update: 20 Apr 2023 14:57:39
