CyanoLyase

PCC7367 strain

[fasta] [gff] [only sure] [only unsure]

Lineage

Prokarya

Cyanobacteria

Oscillatoriales

Pseudanabaena

sp.

Strain information

Phycobiliprotein types: PC+PEI

Habitat: Snail shell. Intertidal zone

Genome sequence

Refseq record: NC_019701

Genome status: complete

Sequencing center: JGI

References

Shih et al., 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Proc Natl Acad Sci U S A, 110, 1053-1058.

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS-I subfamily	Pse7367_3816	YP_007083475.1		208	04-23-2013
CpcV family	Pse7367_3862	YP_007083521.1		201	04-23-2013
CpeT family	Pse7367_3899	YP_007083554.1		212	04-23-2013
CpeY family	Pse7367_3888	YP_007083545.1		442	04-23-2013
CpeZ family	Pse7367_3889	YP_007083546.1		206	04-23-2013
CpeF family	Pse7367_3917	YP_007083570.1		311	04-24-2013
IaiH family	Pse7367_0988	YP_007101715.1		248	04-24-2013
CpeS-I subfamily	Pse7367_3898	YP_007083553.1		183	04-24-2013
T homologs family	Pse7367_0409	YP_007101148.1		211	04-24-2013
L8106_16949 homologs family	Pse7367_2344	YP_007103033.1		423	04-24-2013
CpcS homologs family	Pse7367_3944	YP_007083595.1	N-term shortened (9 aa)	193	07-02-2013
CotB homologs 2 family	Pse7367_3483	YP_007104147.1		223	04-24-2013
CpeU-I subfamily	Pse7367_3939	YP_007083590.1		197	04-29-2013
CpcE-I subfamily	Pse7367_3924	YP_007083576.1	2 copies?	303	06-20-2013
CpcF-I subfamily	Pse7367_3925	YP_007083577.1		256	06-20-2013
CpcT family	Pse7367_2699	YP_007103382.1	Low protomatch score	202	06-20-2013
CpcE-I subfamily	Pse7367_2387	YP_007103076.1	2 copies?	273	06-20-2013
NblB family	Pse7367_2182	YP_007102874.1		241	06-20-2013
CpcU-I subfamily	Pse7367_2638	YP_007103322.1		178	06-20-2013

Model strains, Marine strains

Last update: 25 May 2013 8:55:12

Station biologique de Roscoff

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