CyanoLyase

PCC7420 strain

[fasta] [gff] [only sure] [only unsure]

Lineage

  • Prokarya
    • Cyanobacteria
      • Oscillatoriales
        • Microcoleus
          • chthonoplastes

Strain information

Phycobiliprotein types: PC+PEC

Habitat: halotolerant

Genome sequence

Refseq record: NZ_ABRS00000000

Genome status: incomplete (142 scaffolds)

Sequencing center: JCVI

Gene Locus tag Genbank Remark Length Last change
CpcS-III subfamily MC7420_7485 ZP_05023633.1 186 09-26-2011
CpcT family MC7420_6399 ZP_05026218.1 196 09-26-2011
MC7420_3535 homologs family MC7420_3535 ZP_05029509.1 1322 12-05-2011
PecE family MC7420_3694 ZP_05028438.1 260 09-26-2011
PecF family MC7420_3606 ZP_05028350.1 202 09-26-2011
IaiH family MC7420_1911 ZP_05025197.1 252 10-26-2011
CotB homologs 2 family MC7420_7088 ZP_05023236.1 226 09-26-2011
CpcF-I subfamily MC7420_3666 ZP_05028410.1 216 12-06-2011
CpcE-I subfamily MC7420_3712 ZP_05028456.1 275 12-06-2011
NblB family MC7420_7663 ZP_05023685.1 N-term shortened (11 aa removed: MSDYLLLNTLQ) 218 09-13-2012
MC7420_4701 homologs family MC7420_4701 ZP_05025511.1 455 11-30-2011
L8106_16949 homologs family MC7420_2776 ZP_05030778.1 398 12-05-2011
MC7420_3535 homologs family MC7420_6333 ZP_05026152.1 1184 12-06-2011
MC7420_3535 homologs family MC7420_6677 ZP_05028167.1 1432 12-06-2011
MC7420_3535 homologs family MC7420_6046 ZP_05027237.1 1260 12-06-2011
L8106_22089 homologs family MC7420_2176 ZP_05026788.1 417 12-06-2011
MC7420_3535 homologs family MC7420_4498 ZP_05028866.1 923 12-06-2011
MC7420_4701 homologs family MC7420_1061 ZP_05028540.1 This sequence has a much shorter N-term than others. But not a frameshift. 173 09-11-2012
MC7420_3535 homologs family MC7420_2915 ZP_05024179.1 1355 12-07-2011

Model strain Model strains, Marine strains

Last update: 28 Aug 2012 15:15:00

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