BL107 strain

Subcluster: 5.1

Clade/Ecotype: IV

Subclade: IVa

Phycobiliprotein types: PC+PEI+PEII

Pigment type: 3dA/CA4-A

Habitat: marine

Genome status: complete

Sequencing center: JCVI

Dufresne et al., 2008. Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria Genome Biol, 9, R90.
Humily et al., 2013. A gene island with two possible configurations is involved in chromatic acclimation in marine Synechococcus PLoS One, 8, e84459.
Mazard et al., 2012. Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus Environmental Microbiology, 14, 372–386.
Six et al., 2007. Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study Genome Biol, 8, R259.

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS-II subfamily	BL107_17200	ZP_01468673.1		198	09-26-2011
CpeT family	BL107_08986	ZP_01469900.1		204	09-26-2011
CpeS-II subfamily	BL107_08991	ZP_01469901.1		178	09-26-2011
CpeU-II subfamily	BL107_08896	ZP_01469882.1	N-term extended (8 aa added)	205	09-17-2012
CpeY family	BL107_08931	ZP_01469889.1		444	09-26-2011
CpeZ family	BL107_08936	ZP_01469890.1		209	09-26-2011
MpeU family	BL107_08941	ZP_01469891.1		298	10-25-2011
MpeV family	BL107_08916	ZP_01469886.1		308	04-20-2023
MpeY family	BL107_08961	ZP_01469895.1		400	09-26-2011
MpeZ family	BL107_10891	ZP_01469555.1		409	09-26-2011
RpcG family	BL107_08866	ZP_01469876.1		459	09-26-2011
RpcT family	BL107_08871	ZP_01469877.1		192	09-26-2011
IaiH family	BL107_16005	ZP_01468434.1		270	10-26-2011
CotB homologs 1 family	BL107_05959	ZP_01468938.1		203	09-26-2011
CpcU-II subfamily	BL107_11196	ZP_01469616.1		154	11-04-2011

Model strains, Marine strains

Last update: 19 Jan 2018 15:15:02