PCC7428 strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Prokarya
- Cyanobacteria
- Chroococcales
- Gloeocapsa
- sp.
Strain information
Phycobiliprotein types: PC
Habitat: moderate hot spring
Remark: contains 4 plasmids
Genome sequence
References
- Shih et al., 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Proc Natl Acad Sci U S A, 110, 1053-1058.
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-III subfamily | Glo7428_4424 | YP_007130027.1 | 187 | 04-22-2013 | |
| CpcV family | Glo7428_0828 | YP_007126571.1 | 179 | 04-23-2013 | |
| CpcT family | Glo7428_1581 | YP_007127302.1 | N-term shortened (21 aa) | 196 | 07-02-2013 |
| CpcE-I subfamily | Glo7428_4602 | YP_007130198.1 | 273 | 04-23-2013 | |
| CpcF-I subfamily | Glo7428_4601 | YP_007130197.1 | 208 | 04-23-2013 | |
| IaiH family | Glo7428_1948 | YP_007127656.1 | 253 | 04-24-2013 | |
| NblB family | Glo7428_4688 | YP_007130281.1 | 223 | 04-24-2013 | |
| T homologs family | Glo7428_3236 | YP_007128882.1 | 195 | 04-24-2013 | |
| L8106_16949 homologs family | Glo7428_1959 | YP_007127666.1 | 435 | 04-24-2013 | |
| CotB homologs 2 family | Glo7428_4423 | YP_007130026.1 | 224 | 04-24-2013 |
Model strains, Marine strains
Last update: 25 May 2013 8:29:35
