CyanoLyase

PCC6605 strain

[fasta] [gff] [only sure] [only unsure]

Lineage

Prokarya

Cyanobacteria

Chroococcales

Chamaesiphon

minutus

Strain information

Phycobiliprotein types: PC+PEI

Habitat: freshwater

Remark: contains 2 plasmids

Genome sequence

Refseq record: NC_019697

Genome status: complete

Sequencing center: JGI

References

Shih et al., 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Proc Natl Acad Sci U S A, 110, 1053-1058.

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS-I subfamily	Cha6605_1319	YP_007096040.1		200	04-29-2013
CpcV family	Cha6605_0407	YP_007095229.1		182	04-29-2013
CpcT family	Cha6605_4079	YP_007098562.1		203	04-29-2013
CpeT family	Cha6605_4068	YP_007098551.1		201	04-29-2013
CpcF-I subfamily	Cha6605_3627	YP_007098137.1		269	04-29-2013
CpeY family	Cha6605_4053	YP_007098536.1	N-term shortened (25 aa)	430	07-02-2013
CpeZ family	Cha6605_4052	YP_007098535.1		204	04-29-2013
CpeF family	Cha6605_4057	YP_007098540.1		305	04-29-2013
IaiH family	Cha6605_0246	YP_007095075.1		257	04-29-2013
NblB family	Cha6605_0245	YP_007095074.1		213	04-29-2013
CpeS-I subfamily	Cha6605_4067	YP_007098550.1		178	04-29-2013
L8106_16949 homologs family	Cha6605_0750	YP_007095548.1		451	04-29-2013
CotB homologs 2 family	Cha6605_3987	YP_007098476.1		229	04-29-2013
CpeU-I subfamily	Cha6605_4060	YP_007098543.1		186	04-29-2013
CpcE-I subfamily	Cha6605_1301	YP_007096023.1		271	06-20-2013
CpcU-I subfamily	Cha6605_3988	YP_007098477.1		183	06-20-2013

Model strains, Marine strains

Last update: 25 May 2013 8:45:49

Station biologique de Roscoff

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