PCC7414 strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Prokarya
- Cyanobacteria
- Stigonematales
- Fischerella
- muscicola
Strain information
Phycobiliprotein types: PC+PEC
Habitat: hot spring
Remark: Not available in refseq yet
Bioproject: PRJNA104967
Genbank: AJLK00000000
Genome sequence
Refseq record: AJLK00000000
Genome status: contigs
Sequencing center: Heinrich-Heine-University Duesseldorf
References
- Dagan et al., 2013. Genomes of Stigonematalean cyanobacteria (subsection V) and the evolution of oxygenic photosynthesis from prokaryotes to plastids Genome Biol Evol, 5, 31-44.
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-III subfamily | FisPCC7414_4393 | 187 | 06-12-2013 | ||
| CpcV family | FisPCC7414_2733 | 178 | 06-12-2013 | ||
| CpcT family | FisPCC7414_5831 | 196 | 06-12-2013 | ||
| CpcE-I subfamily | FisPCC7414_3831 | 276 | 06-12-2013 | ||
| CpcF-I subfamily | FisPCC7414_3830 | 207 | 06-12-2013 | ||
| PecE family | FisPCC7414_3837 | N-term shortened (35 aa) | 257 | 07-02-2013 | |
| PecF family | FisPCC7414_3836 | 209 | 06-12-2013 | ||
| IaiH family | FisPCC7414_6969 | 252 | 06-12-2013 | ||
| NblB family | FisPCC7414_2854 | 221 | 06-12-2013 | ||
| T homologs family | FisPCC7414_2376 | 198 | 06-12-2013 | ||
| L8106_16949 homologs family | FisPCC7414_5095 | 404 | 06-12-2013 | ||
| L8106_22089 homologs family | FisPCC7414_5280 | 334 | 06-12-2013 | ||
| CotB homologs 2 family | FisPCC7414_4392 | 226 | 06-12-2013 |
Model strains, Marine strains
Last update: 25 May 2013 9:05:52
