Paraca strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Prokarya
- Cyanobacteria
- Oscillatoriales
- Arthrospira (Spirulina)
- platensis
Strain information
Phycobiliprotein types: PC
Pigment type: 1
Habitat: freshwater
Genome sequence
Refseq record: NZ_ACSK00000000
Genome status: draft (1820 scaffolds)
Sequencing center: University of Applied Sciences of Western Switzerland
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-I subfamily | AplaP_010100006702 | ZP_06381354.1 | 197 | 01-24-2012 | |
| CpcU-I subfamily | AplaP_010100016770 | ZP_06383329.1 | 174 | 01-24-2012 | |
| CpcT family | AplaP_010100001895 | ZP_06380416.1 | 198 | 01-24-2012 | |
| CpcE-I subfamily | AplaP_010100003287 | ZP_06380690.1 | 291 | 01-24-2012 | |
| CpcF-I subfamily | AplaP_010100003292 | ZP_06380691.1 | 210 | 01-24-2012 | |
| IaiH family | AplaP_010100011636 | ZP_06382319.1 | 261 | 01-24-2012 | |
| NblB family | AplaP_010100017289 | ZP_06383430.1 | N-term shortened (18 aa removed: MRVAPDLNRQQLLNCLTK) | 220 | 09-13-2012 |
| L8106_16949 homologs family | AplaP_010100015438 | ZP_06383071.1 | 410 | 01-24-2012 | |
| L8106_22089 homologs family | AplaP_010100006555 | ZP_06381327.1 | 332 | 01-24-2012 | |
| CotB homologs 2 family | AplaP_010100006817 | ZP_06381377.1 | Incomplete - lacks C-term (end of contig) | 154 | 09-13-2012 |
| L8106_11777 homologs family | AplaP_010100002137 | ZP_06380464.1 | Incomplete n-term (end of contig). Almost identical to homologs in other Arthrospira species. | 179 | 08-27-2012 |
Model strains, Marine strains
Last update: 25 Sep 2012 16:02:10
