PCC6406 strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Prokarya
- Cyanobacteria
- Oscillatoriales
- Leptolyngbya
- sp.
Strain information
Phycobiliprotein types: PC+PEC
Habitat: freshwater
Genome sequence
References
- Shih et al., 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Proc Natl Acad Sci U S A, 110, 1053-1058.
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcV family | Lep6406DRAFT_00020650 | ZP_21046658.1 | 178 | 04-29-2013 | |
| CpcT family | Lep6406DRAFT_00020660 | ZP_21046659.1 | 197 | 04-29-2013 | |
| CpcE-I subfamily | Lep6406DRAFT_00020730 | ZP_21046666.1 | 267 | 04-29-2013 | |
| CpcF-I subfamily | Lep6406DRAFT_00020740 | ZP_21046667.1 | 237 | 04-29-2013 | |
| PecE family | Lep6406DRAFT_00020410 | ZP_21046698.1 | 260 | 04-29-2013 | |
| PecF family | Lep6406DRAFT_00020400 | ZP_21046697.1 | 202 | 04-29-2013 | |
| IaiH family | Lep6406DRAFT_00001360 | ZP_21048597.1 | 260 | 04-29-2013 | |
| NblB family | Lep6406DRAFT_00023300 | ZP_21046418.1 | 220 | 04-29-2013 | |
| CpcS homologs family | Lep6406DRAFT_00020640 | ZP_21046657.1 | 186 | 04-29-2013 | |
| CotB homologs 2 family | Lep6406DRAFT_00051850 | ZP_21043592.1 | 223 | 04-29-2013 | |
| CpcS-I subfamily | Lep6406DRAFT_00042270 | ZP_21044550.1 | 198 | 06-20-2013 | |
| T homologs family | Lep6406DRAFT_00020880 | ZP_21046681.1 | 208 | 06-20-2013 | |
| CpcU-I subfamily | Lep6406DRAFT_00043770 | ZP_21044403.1 | 173 | 06-20-2013 |
Model strains, Marine strains
Last update: 25 May 2013 8:50:23
