PCC7417 strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Prokarya
- Cyanobacteria
- Nostocales
- Cylindrospermum
- stagnale
Strain information
Phycobiliprotein types: PC+PEC
Habitat: soil (greenhouse)
Remark: Contains three plasmids
Genome sequence
Refseq record: NC_019757
Sequencing center: JGI
References
- Shih et al., 2013. Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing Proc Natl Acad Sci U S A, 110, 1053-1058.
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-III subfamily | Cylst_0830 | YP_007145836.1 | 191 | 04-23-2013 | |
| CpcV family | Cylst_5166 | YP_007149887.1 | 180 | 04-23-2013 | |
| CpcT family | Cylst_2544 | YP_007147432.1 | 198 | 04-23-2013 | |
| CpcE-I subfamily | Cylst_0755 | YP_007145762.1 | 284 | 04-23-2013 | |
| CpcF-I subfamily | Cylst_0756 | YP_007145763.1 | 200 | 04-23-2013 | |
| PecE family | Cylst_0749 | YP_007145756.1 | 257 | 04-23-2013 | |
| PecF family | Cylst_0750 | YP_007145757.1 | 215 | 04-23-2013 | |
| IaiH family | Cylst_1364 | YP_007146333.1 | 252 | 04-24-2013 | |
| NblB family | Cylst_5091 | YP_007149816.1 | 220 | 04-24-2013 | |
| T homologs family | Cylst_3179 | YP_007148022.1 | 201 | 04-24-2013 | |
| L8106_22089 homologs family | Cylst_6105 | YP_007150756.1 | 391 | 04-24-2013 | |
| CotB homologs 2 family | Cylst_0831 | YP_007145837.1 | 224 | 04-24-2013 |
Model strains, Marine strains
Last update: 25 May 2013 8:24:31
