MBIC11017 strain

Also known as: AM1

Phycobiliprotein types: PC

Pigment type: 1

Habitat: marine

Remark: Chlorophyll d-producing cyanobacterium with phycobiliprotein aggregates but no phycobilisome. Close to CCMEE5410 strain.

Refseq record: NC_009925

Genome status: complete

Sequencing center: TGen Sequencing Center

Mohr et al., 2010. A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris ISME J, 4, 1456-1469.

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS family	AM1_4215	YP_001518512.1	1st copy, strange position in phylogeny. By blast: closer from CpcSI.	197	08-20-2012
CpcS family	AM1_C0217	YP_001521653.1	2nd copy,strange position in phylogeny. By blast: closer from CpcSI. Located on preb3 plasmid.	208	08-20-2012
CpcT family	AM1_C0119	YP_001521565.1	on preb3 plasmid	197	09-26-2011
IaiH family	AM1_2319	YP_001516644.1		252	10-26-2011
CpcE-I subfamily	AM1_C0118	YP_001521564.1	on preb3 plasmid	274	09-26-2011
CpcF-I subfamily	AM1_C0272	YP_001521703.1	on preb3 plasmid	217	09-26-2011
CotB homologs 2 family	AM1_0043	YP_001514445.1		221	09-26-2011
L8106_16949 homologs family	AM1_2983	YP_001517295.1		395	12-05-2011
CpcU-I subfamily	AM1_5938	YP_001520196.1	N-term extended (22 aa added). Low blast and protomatch score with other CpcU-I sequences.	184	09-16-2012

Model strains, Marine strains

Last update: 04 Sep 2012 15:08:46