CyanoLyase

S/U clan - Phycobilin lyases

Description

Members of this group encompass characterized phycobilin lyases as well as enzymes that are uncharacterized so far.

Gene Locus tag Genbank Species Strain PBP in rods Pigment type Remark Length Last change
CpcS family AM1_4215 YP_001518512.1 Acaryochloris marina MBIC11017 (AM1) PC 1 1st copy, strange position in phylogeny. By blast: closer from CpcSI. 197 08-20-2012
CpcS family AM1_C0217 YP_001521653.1 Acaryochloris marina MBIC11017 (AM1) PC 1 2nd copy,strange position in phylogeny. By blast: closer from CpcSI. Located on preb3 plasmid. 208 08-20-2012
CpcS family CMR092C Cyanidioschyzon merolae 10D PC 1 long N-term compared to cyanobacterial CpcS sequences, found by tblastn 405 02-21-2012
CpcS-I subfamily S7335_4321 ZP_05037881.1 Synechococcus sp. PCC7335 PC+PEI CA3 This sequence is closely related to CpcS-I, but the genome of PCC7335 apparently does not contain any CpcU-I, possibly because it is incomplete. 200 10-03-2012
CpcS-I subfamily SYNPCC7002_A1822 YP_001735066.1 Synechococcus sp. PCC7002 PC 1 198 09-26-2011
CpcS-I subfamily slr2049 NP_440437.1 Synechocystis sp. PCC6803 (ATCC27184) PC 1 192 09-26-2011
CpcS-I subfamily AmaxDRAFT_2794 ZP_03273970.1 Arthrospira (Spirulina) maxima CS-328 PC 1 197 09-26-2011
CpcS-I subfamily CwatDRAFT_6342 ZP_00514111.1 Crocosphaera watsonii WH8501 PC+PEI 197 09-26-2011
CpcS-I subfamily cce_3207 YP_001804621.1 Cyanothece sp. ATCC51142 PC 1 198 09-26-2011
CpcS-I subfamily PCC7424_3509 YP_002378769.1 Cyanothece sp. PCC7424 PC+PEI 2 197 09-26-2011
CpcS-I subfamily PCC8801_1352 YP_002371570.1 Cyanothece sp. PCC8801 PC+PEI 2 200 09-26-2011
CpcS-I subfamily Cyan8802_1382 YP_003137135.1 Cyanothece sp. PCC8802 PC 1 200 09-26-2011
CpcS-I subfamily CY0110_04081 ZP_01730273.1 Cyanothece sp. CCY0110 PC 1 197 09-26-2011
CpcS-I subfamily Cyan7822_2533 YP_003887780.1 Cyanothece sp. PCC7822 PC+PEI 2 198 09-26-2011
CpcS-I subfamily gvip161 NP_924137.1 Gloeobacter violaceus PCC7421 PC+PEI 2 strange position in phylo 201 11-24-2011
CpcS-I subfamily GL6909_5285 Gloeothece sp. PCC6909/1 PC+PEI 2 198 05-31-2011
CpcS-I subfamily L8106_24665 ZP_01619909.1 Lyngbya aestuarii CCY9616 (PCC8106/CCY8106) PC 1 No other start codon before this sequence 197 09-26-2011
CpcS-I subfamily MAE_48330 YP_001659847.1 Microcystis aeruginosa NIES-843 PC 1 A stop codon, then 4aa, then the start codon 193 09-26-2011
CpcS-I subfamily Npun_F3809 YP_001867136.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 CpcSIII in Schluchter et al., 2010? 206 09-26-2011
CpcS-I subfamily Synpcc7942_2031 YP_401048.1 Synechococcus elongatus PCC7942 PC 1 193 09-26-2011
CpcS-I subfamily syc2064_d YP_172774.1 Synechococcus elongatus PCC6301 (ATCC 27144) PC 1 193 11-25-2011
CpcS-I subfamily Tery_3908 YP_723414.1 Trichodesmium erythraeum IMS101 PC+PEI N-term shortened (5 aa removed: MEYRL) 196 08-30-2012
CpcS-I subfamily OSCI_700007 ZP_07109069.1 Oscillatoria sp. PCC6506 (PCC9029/ATCC29081 /UTEX 1547) PC 1 197 10-19-2011
CpcS-I subfamily LYNGBM3L_55940 ZP_08427741.1 Lyngbya majuscula 3L PC+PEI 2 216 10-19-2011
CpcS-I subfamily MicvaDRAFT_5174 ZP_08495221.1 Microcoleus vaginatus FGP-2 PC 1 198 10-20-2011
CpcS-I subfamily IPF_855 CAO87966.1 Microcystis aeruginosa PCC7806 PC 1 193 10-20-2011
CpcS-I subfamily NIES39_A02700 BAI88109.1 Arthrospira (Spirulina) platensis NIES-39 PC 1 197 10-20-2011
CpcS-I subfamily Cy51472DRAFT_4686 ZP_08975889.1 Cyanothece sp. ATCC51472 PC 1 198 01-10-2012
CpcS-I subfamily AplaP_010100006702 ZP_06381354.1 Arthrospira (Spirulina) platensis Paraca PC 1 197 01-24-2012
CpcS-I subfamily ACCM5_010100032969 ZP_09252138.1 Acaryochloris sp. CCMEE5410 APC only 196 08-24-2012
CpcS-I subfamily CWATWH0003_0565 EHJ14767.1 Crocosphaera watsonii WH0003 PC+PEI 197 02-22-2012
CpcS-I subfamily MICAI_250011 ZP_10228158.1 Microcystis sp. T1-4 PC+PEI 2 193 09-16-2012
CpcS-I subfamily MICAG_860004 CCI29527.1 Microcystis aeruginosa PCC9808 PC 1 193 08-22-2012
CpcS-I subfamily MICAB_3830008 CCH97799.1 Microcystis aeruginosa PCC9717 PC 1 193 08-23-2012
CpcS-I subfamily MICAK_3480004 CCI37760.1 Microcystis aeruginosa PCC9701 PC 1 193 08-23-2012
CpcS-I subfamily MICAC_4950001 CCI03754.1 Microcystis aeruginosa PCC9443 PC 1 193 08-23-2012
CpcS-I subfamily MICCA_980010 ZP_18815604.1 Microcystis aeruginosa PCC9432 PC 1 193 04-22-2013
CpcS-I subfamily MICAD_310004 CCI08315.1 Microcystis aeruginosa PCC7941 PC 1 193 08-23-2012
CpcS-I subfamily Osc7112_3154 YP_007115956.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 198 04-22-2013
CpcS-I subfamily Sta7437_2864 YP_007133350.1 Stanieria cyanosphaera PCC7437 PC+PEI 199 04-22-2013
CpcS-I subfamily O53_3911 ZP_20934710.1 Microcystis aeruginosa TAIHU98 PC 1 193 04-22-2013
CpcS-I subfamily Lepto7376_3399 YP_007072440.1 Leptolyngbya sp. PCC7376 PC+PEI 200 04-23-2013
CpcS-I subfamily Cyast_1790 YP_007165395.1 Cyanobacterium stanieri PCC7202 PC 196 04-23-2013
CpcS-I subfamily Ple7327_2633 YP_007081472.1 Pleurocapsa sp. PCC7327 PC+PEI 198 04-23-2013
CpcS-I subfamily Xen7305DRAFT_00011740 ZP_21056994.1 Xenococcus sp. PCC7305 PC+PEI 199 04-23-2013
CpcS-I subfamily PCC7418_3218 YP_007169548.1 Halothece sp. PCC7418 PC 193 04-23-2013
CpcS-I subfamily GLO73106DRAFT_00025640 ZP_21050308.1 Gloeocapsa sp. PCC73106 PC+PEI 197 04-23-2013
CpcS-I subfamily Dacsa_0540 YP_007170680.1 Dactylococcopsis salina PCC8305 194 04-23-2013
CpcS-I subfamily Pse7367_3816 YP_007083475.1 Pseudanabaena sp. PCC7367 PC+PEI 208 04-23-2013
CpcS-I subfamily Mic7113_2585 YP_007121784.1 Microcoleus sp. PCC7113 PC+PEI 2 205 04-23-2013
CpcS-I subfamily ZP_18908102 ZP_18908102.1 Leptolyngbya sp. PCC7375 PC+PEI 2 204 04-23-2013
CpcS-I subfamily Pse7429DRAFT_3448 ZP_21067785.1 Pseudanabaena sp. (biceps) PCC7429 PC 200 04-24-2013
CpcS-I subfamily Oscil6304_1130 YP_007084776.1 Oscillatoria acuminata PCC6304 (SAG 1449-3) PC 203 04-29-2013
CpcS-I subfamily Cyan10605_0823 YP_007160999.1 Cyanobacterium aponimum PCC10605 194 04-29-2013
CpcS-I subfamily Cha6605_1319 YP_007096040.1 Chamaesiphon minutus PCC6605 PC+PEI 200 04-29-2013
CpcS-I subfamily LepboDRAFT_3190 Leptolyngbya boryana PCC6306 PC 195 06-11-2013
CpcS-I subfamily Osc10802DRAFT_6754 Oscillatoria sp. PCC10802 PC+PEI 204 06-12-2013
CpcS-I subfamily Cal6303_1002 YP_007136039.1 Calothrix sp. PCC6303 PC+PEI 2 196 06-20-2013
CpcS-I subfamily Lep6406DRAFT_00042270 ZP_21044550.1 Leptolyngbya sp. PCC6406 PC+PEC 198 06-20-2013
CpcS-II subfamily sync_2487 YP_731681.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 203 09-26-2011
CpcS-II subfamily Syncc9605_2286 YP_382575.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 197 09-26-2011
CpcS-II subfamily SH8109_0894 ZP_05790285.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 197 09-26-2011
CpcS-II subfamily SYNW0315 NP_896410.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 198 09-26-2011
CpcS-II subfamily Syncc9902_0400 YP_376414.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 198 09-26-2011
CpcS-II subfamily BL107_17200 ZP_01468673.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 198 09-26-2011
CpcS-II subfamily SynWH7803_2155 YP_001225878.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 196 09-26-2011
CpcS-II subfamily WH7805_11643 ZP_01122710.1 Synechococcus sp. WH7805 PC+PEI 2 196 09-26-2011
CpcS-II subfamily RS9917_07715 ZP_01081133.1 Synechococcus sp. RS9917 PC 1 206 09-26-2011
CpcS-II subfamily RS9916_35312 ZP_01471093.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 202 09-26-2011
CpcS-II subfamily WH5701_15871 ZP_01084219.1 Synechococcus sp. WH5701 PC 1 Frameshifted; join(2811210..2811479,2811479..2811838) 209 09-26-2011
CpcS-II subfamily SynRCC307_2024 YP_001228280.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 196 09-26-2011
CpcS-II subfamily SCB01_010100002463 ZP_07972490.1 Synechococcus sp. CB0101 PC 1 MAACDHRCTRRAA removed at the beginning 203 11-04-2011
CpcS-II subfamily SCB02_010100000529 ZP_07969387.1 Synechococcus sp. CB0205 PC+PEI 2 201 11-04-2011
CpcS-II subfamily CPCC7001_2732 ZP_05046541.1 Cyanobium sp. PCC7001 PC 1 200 09-26-2011
CpcS-II subfamily Syn8016DRAFT_2357 ZP_08957012.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 203 11-04-2011
CpcS-II subfamily PCC_0659 YP_002049288.1 Paulinella chromatophora M0880 PC 1 Protoscan score is not very high, but it matches CpcS-II best 198 08-30-2012
CpcS-II subfamily SynWH8020_CpcSII Synechococcus sp. WH8020 PC+PEI+PEII 3d/CA4 From unpublished WH8020 genome 203 08-27-2012
CpcS-II subfamily Cyagr_1540 YP_007046040.1 Cyanobium gracile PCC6307 PC 206 04-29-2013
CpcS-III subfamily alr0617 NP_484661.1 Anabaena (Nostoc) sp. PCC7120 PC+PEC 188 09-26-2011
CpcS-III subfamily Ava_4549 YP_325042.1 Anabaena variabilis ATCC29413 (PCC7937) PC+PEC 188 09-27-2011
CpcS-III subfamily Aazo_1709 YP_003720981.1 Anabaena (Nostoc) azollae 0708 PC+PEC 191 09-26-2011
CpcS-III subfamily Cyan7425_2083 YP_002482807.1 Cyanothece sp. PCC7425 PC 1 188 09-26-2011
CpcS-III subfamily FJSC11DRAFT_1071 ZP_08984865.1 Fischerella sp. (Mastigocladus laminosus) JSC-11 PC+PEC 187 11-04-2011
CpcS-III subfamily MC7420_7485 ZP_05023633.1 Microcoleus chthonoplastes PCC7420 PC+PEC 186 09-26-2011
CpcS-III subfamily N9414_02356 ZP_01632464.1 Nodularia spumigena CCY9414 PC 1 188 09-26-2011
CpcS-III subfamily CYB_2841 YP_479027.1 Synechococcus sp. JA-2-3B'a(2-13) PC 1 190 09-26-2011
CpcS-III subfamily CYA_2807 YP_476172.1 Synechococcus sp. JA-3-3Ab PC 1 187 09-26-2011
CpcS-III subfamily tll1699 NP_682489.1 Thermosynechococcus elongatus BP-1 PC 1 3D structure available (pdb:3BDR). N-term shortened (4 aa removed) 178 08-29-2012
CpcS-III subfamily CRD_00076 ZP_06303581.1 Raphidiopsis brookii D9 PC 1 Contains a group II intron containing an orf (gi|282895443|ref|ZP_06303580.1|)
This sequence is the fusion of CRD_00076 and CRD_00074 (KHEGSTVLVTVPDLLKPGEGKLLRE added before CRD_00074)
197 11-02-2011
CpcS-III subfamily CRC_02172 ZP_06308247.1 Cylindrospermopsis raciborskii CS-505 PC 1 Fusion of CRC_02170 and CRC_02172. Contains a group II intron (same as D9 strain). KHEGSTVLVTVPDLLKPGEGKLLRE added before CRC_02172 197 12-02-2011
CpcS-III subfamily GEI7407_2263 YP_007109790.1 Geitlerinema sp. PCC7407 PC 186 06-20-2013
CpcS-III subfamily Cri9333_3248 YP_007143590.1 Crinalium epipsammum PCC9333 PC 186 06-20-2013
CpcS-III subfamily Glo7428_4424 YP_007130027.1 Gloeocapsa sp. PCC7428 PC 187 04-22-2013
CpcS-III subfamily Syn7509DRAFT_00025220 ZP_21040972.1 Synechocystis sp. PCC7509 PC 185 04-22-2013
CpcS-III subfamily Anacy_0109 YP_007154628.1 Anabaena cylindrica PCC7122 PC+PEC 190 04-23-2013
CpcS-III subfamily Cylst_0830 YP_007145836.1 Cylindrospermum stagnale PCC7417 PC+PEC 191 04-23-2013
CpcS-III subfamily Nos7524_3943 YP_007077313.1 Nostoc sp. PCC7524 PC+PEC 187 04-23-2013
CpcS-III subfamily Riv7116_2426 YP_007055488.1 Rivularia sp. PCC7116 PC+PEC 188 04-23-2013
CpcS-III subfamily Chro_1676 YP_007091064.1 Chroococcidiopsis thermalis PCC7203 PC+PEC 186 04-23-2013
CpcS-III subfamily Nos7107_3741 YP_007051452.1 Nostoc sp. PCC7107 PC+PEC 187 04-29-2013
CpcS-III subfamily Cal7507_3605 YP_007066831.1 Calothrix sp. PCC7507 PC+PEC 188 04-29-2013
CpcS-III subfamily Fis9431DRAFT_3727 Fischerella sp. PCC9431 PC+PEC 187 06-12-2013
CpcS-III subfamily FIS9605DRAFT_06979 Fischerella sp. PCC9605 PC+PEC 188 06-12-2013
CpcS-III subfamily FisPCC73103_3408 Fischerella muscicola PCC73103 (SAG 1427-1) PC+PEC 187 06-12-2013
CpcS-III subfamily Scytonema_PCC7110_joined_11887 Scytonema hofmanni PCC7110 PC+PEC 189 06-12-2013
CpcS-III subfamily PCC9339DRAFT_01730 Fischerella sp. PCC9339 PC+PEC 187 06-12-2013
CpcS-III subfamily Ana7108_2980 Anabaena sp. PCC7108 PC+PEC 191 06-12-2013
CpcS-III subfamily Chloroglopsis_PCC9212_joined_7598 Chlorogloeopsis sp. PCC9212 PC+PEC 189 06-12-2013
CpcS-III subfamily UYC_05286 Chlorogloeopsis fritschii PCC6912 PC+PEC 189 06-12-2013
CpcS-III subfamily FisPCC7414_4393 Fischerella muscicola PCC7414 PC+PEC 187 06-12-2013
CpcS-III subfamily Fischerella_sp._PCC7521_3615 Fischerella thermalis PCC7521 PC+PEC 187 06-12-2013
CpcS-III subfamily Syn6312_0613 YP_007060377.1 Synechococcus sp. PCC6312 PC 186 06-12-2013
CpcS-III subfamily Syn7502_02665 YP_007106758.1 Synechococcus sp. PCC7502 PC 172 06-20-2013
CpcS-III subfamily Mic7113_0798 YP_007120112.1 Microcoleus sp. PCC7113 PC+PEI 2 Found both CpcS-I and CpcS-III in this strain? 188 06-20-2013
CpcU-I subfamily SYNPCC7002_A2053 YP_001735295.1 Synechococcus sp. PCC7002 PC 1 183 09-26-2011
CpcU-I subfamily Sll0853 NP_441116.1 Synechocystis sp. PCC6803 (ATCC27184) PC 1 N-term shortened (11 aa removed: MKPVAPRSFFA) 175 09-16-2012
CpcU-I subfamily AmaxDRAFT_1245 ZP_03272427.1 Arthrospira (Spirulina) maxima CS-328 PC 1 Fairly low blast score to other CpcU-I sequences. 172 09-16-2012
CpcU-I subfamily CwatDRAFT_4215 ZP_00515818.1 Crocosphaera watsonii WH8501 PC+PEI 175 09-26-2011
CpcU-I subfamily cce_3775 YP_001805189.1 Cyanothece sp. ATCC51142 PC 1 N-term shortened (2 aa removed: MF) 175 09-16-2012
CpcU-I subfamily PCC7424_0571 YP_002375901.1 Cyanothece sp. PCC7424 PC+PEI 2 172 09-26-2011
CpcU-I subfamily PCC8801_1382 YP_002371598.1 Cyanothece sp. PCC8801 PC+PEI 2 176 09-26-2011
CpcU-I subfamily Cyan8802_1416 YP_003137168.1 Cyanothece sp. PCC8802 PC 1 176 09-26-2011
CpcU-I subfamily CY0110_18677 ZP_01727104.1 Cyanothece sp. CCY0110 PC 1 175 09-26-2011
CpcU-I subfamily Cyan7822_1691 YP_003886955.1 Cyanothece sp. PCC7822 PC+PEI 2 172 09-26-2011
CpcU-I subfamily glr1614 NP_924560.1 Gloeobacter violaceus PCC7421 PC+PEI 2 212 09-26-2011
CpcU-I subfamily GL6909_0312 Gloeothece sp. PCC6909/1 PC+PEI 2 172 05-31-2011
CpcU-I subfamily L8106_16679 ZP_01620367.1 Lyngbya aestuarii CCY9616 (PCC8106/CCY8106) PC 1 176 09-26-2011
CpcU-I subfamily MAE_56790 YP_001660693.1 Microcystis aeruginosa NIES-843 PC 1 170 09-26-2011
CpcU-I subfamily Npun_R1154 YP_001864823.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 188 09-26-2011
CpcU-I subfamily Synpcc7942_0161 YP_399180.1 Synechococcus elongatus PCC7942 PC 1 N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. 180 09-16-2012
CpcU-I subfamily Tery_3198 YP_722794.1 Trichodesmium erythraeum IMS101 PC+PEI 174 09-26-2011
CpcU-I subfamily OSCI_1150017 ZP_07109767.1 Oscillatoria sp. PCC6506 (PCC9029/ATCC29081 /UTEX 1547) PC 1 192 10-19-2011
CpcU-I subfamily LYNGBM3L_17960 ZP_08426426.1 Lyngbya majuscula 3L PC+PEI 2 Protomata tells it is CpcU.
Blast tells it is CpcSIII (but with a 17aa gap)
190 10-19-2011
CpcU-I subfamily MicvaDRAFT_5310 ZP_08492814.1 Microcoleus vaginatus FGP-2 PC 1 169 10-20-2011
CpcU-I subfamily IPF_3445 CAO90549.1 Microcystis aeruginosa PCC7806 PC 1 171 10-20-2011
CpcU-I subfamily NIES39_R01090 BAI94418.1 Arthrospira (Spirulina) platensis NIES-39 PC 1 174 10-20-2011
CpcU-I subfamily syc1345_c YP_172055.1 Synechococcus elongatus PCC6301 (ATCC 27144) PC 1 N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. 180 09-16-2012
CpcU-I subfamily AM1_5938 YP_001520196.1 Acaryochloris marina MBIC11017 (AM1) PC 1 N-term extended (22 aa added). Low blast and protomatch score with other CpcU-I sequences. 184 09-16-2012
CpcU-I subfamily Cy51472DRAFT_2075 ZP_08973279.1 Cyanothece sp. ATCC51472 PC 1 175 01-10-2012
CpcU-I subfamily AplaP_010100016770 ZP_06383329.1 Arthrospira (Spirulina) platensis Paraca PC 1 174 01-24-2012
CpcU-I subfamily ACCM5_010100021921 ZP_09249963.1 Acaryochloris sp. CCMEE5410 APC only 184 01-24-2012
CpcU-I subfamily CWATWH0003_2252 EHJ13063.1 Crocosphaera watsonii WH0003 PC+PEI 175 02-22-2012
CpcU-I subfamily MICAI_560047 ZP_10229859.1 Microcystis sp. T1-4 PC+PEI 2 170 08-22-2012
CpcU-I subfamily MICAG_930008 CCI29657.1 Microcystis aeruginosa PCC9808 PC 1 170 08-22-2012
CpcU-I subfamily MICAB_5520008 CCH98898.1 Microcystis aeruginosa PCC9717 PC 1 170 08-23-2012
CpcU-I subfamily MICAK_3340003 CCI37521.1 Microcystis aeruginosa PCC9701 PC 1 170 08-23-2012
CpcU-I subfamily MICAC_1120009 CCI00723.1 Microcystis aeruginosa PCC9443 PC 1 171 08-23-2012
CpcU-I subfamily MICAD_2540005 CCI07478.1 Microcystis aeruginosa PCC7941 PC 1 170 08-23-2012
CpcU-I subfamily O53_764 ZP_20931601.1 Microcystis aeruginosa TAIHU98 PC 1 170 04-22-2013
CpcU-I subfamily Osc7112_0647 YP_007113656.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 169 04-22-2013
CpcU-I subfamily Oscil6304_5543 YP_007088946.1 Oscillatoria acuminata PCC6304 (SAG 1449-3) PC 177 04-22-2013
CpcU-I subfamily MICCA_1100007 ZP_18815797.1 Microcystis aeruginosa PCC9432 PC 1 170 04-29-2013
CpcU-I subfamily Xen7305DRAFT_00032080 ZP_21054973.1 Xenococcus sp. PCC7305 PC+PEI 177 04-29-2013
CpcU-I subfamily Osc10802DRAFT_5465 Oscillatoria sp. PCC10802 PC+PEI N-term shortened (44 aa) 185 07-02-2013
CpcU-I subfamily Cha6605_3988 YP_007098477.1 Chamaesiphon minutus PCC6605 PC+PEI 183 06-20-2013
CpcU-I subfamily Sta7437_1181 YP_007131718.1 Stanieria cyanosphaera PCC7437 PC+PEI 186 06-20-2013
CpcU-I subfamily Cal6303_1972 YP_007136977.1 Calothrix sp. PCC6303 PC+PEI 2 176 06-20-2013
CpcU-I subfamily Lepto7376_2440 YP_007071553.1 Leptolyngbya sp. PCC7376 PC+PEI 183 06-20-2013
CpcU-I subfamily Pse7367_2638 YP_007103322.1 Pseudanabaena sp. PCC7367 PC+PEI 178 06-20-2013
CpcU-I subfamily Lep6406DRAFT_00043770 ZP_21044403.1 Leptolyngbya sp. PCC6406 PC+PEC 173 06-20-2013
CpcU-I subfamily GLO73106DRAFT_00011320 ZP_21051667.1 Gloeocapsa sp. PCC73106 PC+PEI 174 06-20-2013
CpcU-I subfamily Cyast_0213 YP_007163844.1 Cyanobacterium stanieri PCC7202 PC 173 06-20-2013
CpcU-I subfamily Cyan10605_0119 YP_007160321.1 Cyanobacterium aponimum PCC10605 182 06-20-2013
CpcU-I subfamily Lepto7375DRAFT_4641 ZP_18909026.1 Leptolyngbya sp. PCC7375 PC+PEI 2 169 06-20-2013
CpcU-I subfamily PCC7418_3771 YP_007170089.1 Halothece sp. PCC7418 PC 179 06-20-2013
CpcU-I subfamily Dacsa_0519 YP_007170660.1 Dactylococcopsis salina PCC8305 190 06-20-2013
CpcU-II subfamily PCC_0138 YP_002048800.1 Paulinella chromatophora M0880 PC 1 157 09-16-2012
CpcU-II subfamily BL107_11196 ZP_01469616.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 154 11-04-2011
CpcU-II subfamily sync_0774 YP_729988.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 158 11-04-2011
CpcU-II subfamily Syncc9605_0889 YP_381212.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 153 11-04-2011
CpcU-II subfamily Syncc9902_1509 YP_377511.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 154 11-04-2011
CpcU-II subfamily SynRCC307_1726 YP_001227982.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 151 11-04-2011
CpcU-II subfamily RS9916_33072 ZP_01470645.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 N-term possibly 12 aa too long 169 09-16-2012
CpcU-II subfamily RS9917_01916 ZP_01081335.1 Synechococcus sp. RS9917 PC 1 156 11-04-2011
CpcU-II subfamily WH5701_14506 ZP_01083946.1 Synechococcus sp. WH5701 PC 1 162 11-04-2011
CpcU-II subfamily SynWH7803_1725 YP_001225448.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 153 11-04-2011
CpcU-II subfamily WH7805_05516 ZP_01124634.1 Synechococcus sp. WH7805 PC+PEI 2 N-term shortened (7 aa removed: MSCEDGS) 153 09-16-2012
CpcU-II subfamily SYNW1611 NP_897704.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 154 11-04-2011
CpcU-II subfamily Syn8016DRAFT_2448 ZP_08957102.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 158 12-02-2011
CpcU-II subfamily SH8109_1400 ZP_05790078.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 153 12-02-2011
CpcU-II subfamily SCB02_010100006257 ZP_07970508.1 Synechococcus sp. CB0205 PC+PEI 2 154 12-02-2011
CpcU-II subfamily SCB01_010100010455 ZP_07974079.1 Synechococcus sp. CB0101 PC 1 161 12-02-2011
CpcU-II subfamily CPCC7001_xx Cyanobium sp. PCC7001 PC 1 Found using tblastn. Orf not detected in refseq. 166 02-21-2012
CpcU-II subfamily Cyagr_1229 YP_007045748.1 Cyanobium gracile PCC6307 PC 177 04-29-2013
CpeS-I subfamily S7335_2433 ZP_05036001.1 Synechococcus sp. PCC7335 PC+PEI CA3 176 09-26-2011
CpeS-I subfamily CwatDRAFT_5719 ZP_00514726.1 Crocosphaera watsonii WH8501 PC+PEI 179 09-26-2011
CpeS-I subfamily PCC7424_5723 YP_002381018.1 Cyanothece sp. PCC7424 PC+PEI 2 177 09-26-2011
CpeS-I subfamily PCC8801_4527 YP_002364804.1 Cyanothece sp. PCC8801 PC+PEI 2 179 09-26-2011
CpeS-I subfamily Cyan7822_4033 YP_003889233.1 Cyanothece sp. PCC7822 PC+PEI 2 177 09-26-2011
CpeS-I subfamily gi|145967347|gb|ABP99029.1| ABP99029.1 Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) Fd33 (UTEX481/PCC7601) PC+PEI CA3 N-term shortened (6 aa removed: METKVL). C-term much longer than in other CpeS-I sequences and also includes a specific sequence at between aa 103-112. 215 09-17-2012
CpeS-I subfamily gvip162 NP_924138.1 Gloeobacter violaceus PCC7421 PC+PEI 2 180 11-24-2011
CpeS-I subfamily GL6909_3548 Gloeothece sp. PCC6909/1 PC+PEI 2 179 05-31-2011
CpeS-I subfamily Npun_F0737 YP_001864432.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 178 09-26-2011
CpeS-I subfamily Tery_4106 YP_723587.1 Trichodesmium erythraeum IMS101 PC+PEI 173 09-26-2011
CpeS-I subfamily OSCI_1700002 ZP_07110201.1 Oscillatoria sp. PCC6506 (PCC9029/ATCC29081 /UTEX 1547) PC 1 N-term shortened (2 aa removed: MP) 177 09-16-2012
CpeS-I subfamily LYNGBM3L_16710 ZP_08428242.1 Lyngbya majuscula 3L PC+PEI 2 178 10-19-2011
CpeS-I subfamily CWATWH0003_1105 EHJ14216.1 Crocosphaera watsonii WH0003 PC+PEI 179 02-22-2012
CpeS-I subfamily MICAI_380005 ZP_10229442.1 Microcystis sp. T1-4 PC+PEI 2 177 08-22-2012
CpeS-I subfamily Osc7112_1030 YP_007114004.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 181 04-24-2013
CpeS-I subfamily Ple7327_0106 YP_007079149.1 Pleurocapsa sp. PCC7327 PC+PEI 178 04-24-2013
CpeS-I subfamily Mic7113_4756 YP_007123835.1 Microcoleus sp. PCC7113 PC+PEI 2 175 04-24-2013
CpeS-I subfamily Pse7367_3898 YP_007083553.1 Pseudanabaena sp. PCC7367 PC+PEI 183 04-24-2013
CpeS-I subfamily GLO73106DRAFT_00012580 ZP_21051594.1 Gloeocapsa sp. PCC73106 PC+PEI 176 04-24-2013
CpeS-I subfamily Xen7305DRAFT_00019040 ZP_21056252.1 Xenococcus sp. PCC7305 PC+PEI 181 04-24-2013
CpeS-I subfamily Lepto7376_0477 YP_007069743.1 Leptolyngbya sp. PCC7376 PC+PEI 177 04-24-2013
CpeS-I subfamily ZP_18907660 ZP_18907660.1 Leptolyngbya sp. PCC7375 PC+PEI 2 175 04-24-2013
CpeS-I subfamily Cal6303_1334 YP_007136366.1 Calothrix sp. PCC6303 PC+PEI 2 180 04-29-2013
CpeS-I subfamily Sta7437_0960 YP_007131508.1 Stanieria cyanosphaera PCC7437 PC+PEI 179 04-29-2013
CpeS-I subfamily Cha6605_4067 YP_007098550.1 Chamaesiphon minutus PCC6605 PC+PEI 178 04-29-2013
CpeS-I subfamily Osc10802DRAFT_5368 Oscillatoria sp. PCC10802 PC+PEI 194 06-12-2013
CpeS-I subfamily Pse7429DRAFT_1237 ZP_21065324.1 Pseudanabaena sp. (biceps) PCC7429 PC 180 06-20-2013
CpeS-II subfamily sync_0510 YP_729737.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 179 09-26-2011
CpeS-II subfamily Syncc9605_0441 YP_380772.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 180 09-26-2011
CpeS-II subfamily SH8109_0064 ZP_05789382.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 180 09-26-2011
CpeS-II subfamily SYNW2002 NP_898093.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 180 09-26-2011
CpeS-II subfamily Syncc9902_1886 YP_377887.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily BL107_08991 ZP_01469901.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily SynWH7803_0499 YP_001224222.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 178 09-26-2011
CpeS-II subfamily WH7805_06671 ZP_01123334.1 Synechococcus sp. WH7805 PC+PEI 2 178 09-26-2011
CpeS-II subfamily RS9916_40271 ZP_01473097.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily SynRCC307_2041 YP_001228297.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 177 09-26-2011
CpeS-II subfamily SCB02_010100004283 ZP_07970126.1 Synechococcus sp. CB0205 PC+PEI 2 177 11-04-2011
CpeS-II subfamily Syn8016DRAFT_2761 ZP_08957414.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 179 11-04-2011
CpeS-II subfamily NATL1_03911 YP_001014220.1 Prochlorococcus marinus NATL1A PEIII high b/a N-term extended (16 aa added) 177 08-28-2012
CpeS-II subfamily PMN2A_1677 YP_292868.1 Prochlorococcus marinus NATL2A PEIII high b/a 177 11-25-2011
CpeS-II subfamily Pro0343 NP_874737.1 Prochlorococcus marinus SS120 (CCMP1375) PEIII high b/a 181 11-25-2011
CpeS-II subfamily P9211_03381 YP_001550223.1 Prochlorococcus marinus MIT9211 PEIII High b/a 178 11-25-2011
CpeS-II subfamily P9303_22301 YP_001018230.1 Prochlorococcus sp. MIT9303 PEIII high b/a N-term extended: MNIEQFVDQSEGTWRS added by FP 177 09-26-2011
CpeS-II subfamily PMT1677 NP_895504.1 Prochlorococcus sp. MIT9313 PEIII high b/a 177 09-26-2011
CpeS-II subfamily SynWH8020_CpeSII Synechococcus sp. WH8020 PC+PEI+PEII 3d/CA4 From unpublished WH8020 genome 179 08-27-2012
CpeS-ProHL subfamily PMM0306 NP_892425.1 Prochlorococcus marinus MED4 (CCMP1986/CCMP1378) beta-PEIII low b/a 183 09-26-2011
CpeS-ProHL subfamily P9515_03401 YP_001010656.1 Prochlorococcus marinus MIT9515 beta-PEIII low b/a 183 09-26-2011
CpeS-ProHL subfamily P9301_03311 YP_001090555.1 Prochlorococcus marinus MIT9301 beta-PEIII low b/a 182 09-26-2011
CpeS-ProHL subfamily A9601_03301 YP_001008725.1 Prochlorococcus marinus AS9601 beta-PEIII low b/a 183 09-26-2011
CpeS-ProHL subfamily P9215_03311 YP_001483534.1 Prochlorococcus marinus MIT9215 beta-PEIII low b/a 183 09-26-2011
CpeS-ProHL subfamily PMT9312_0308 YP_396805.1 Prochlorococcus marinus MIT9312 beta-PEIII low b/a 183 09-26-2011
CpeS-ProHL subfamily PUH18301_0334 Prochlorococcus marinus UH18301 beta-PEIII low b/a 183 05-31-2011
CpeS-ProHL subfamily P9202_xx Prochlorococcus marinus MIT9202 beta-PEIII low b/a Not in Refseq, found with tblastn in JCVI sequence 183 02-21-2012
CpeU-I subfamily S7335_5494 ZP_05039049.1 Synechococcus sp. PCC7335 PC+PEI CA3 185 11-25-2011
CpeU-I subfamily PCC7424_5736 YP_002381031.1 Cyanothece sp. PCC7424 PC+PEI 2 197 11-25-2011
CpeU-I subfamily PCC8801_4521 YP_002364799.1 Cyanothece sp. PCC8801 PC+PEI 2 194 11-25-2011
CpeU-I subfamily Cyan7822_4040 YP_003889240.1 Cyanothece sp. PCC7822 PC+PEI 2 196 11-25-2011
CpeU-I subfamily glr1259 NP_924205.1 Gloeobacter violaceus PCC7421 PC+PEI 2 197 11-25-2011
CpeU-I subfamily GL6909_3539 Gloeothece sp. PCC6909/1 PC+PEI 2 190 11-25-2011
CpeU-I subfamily Npun_R0731 YP_001864426.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 191 11-25-2011
CpeU-I subfamily Tery_4111 YP_723592.1 Trichodesmium erythraeum IMS101 PC+PEI 193 11-25-2011
CpeU-I subfamily LYNGBM3L_55920 ZP_08427738.1 Lyngbya majuscula 3L PC+PEI 2 197 11-25-2011
CpeU-I subfamily AAQ63051 AAQ63051.1 Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) Fd33 (UTEX481/PCC7601) PC+PEI CA3 orf2 in pebAB operon. N-term shortened (14 aa removed: MKCEVSSHFIRGAV) 195 09-16-2012
CpeU-I subfamily MICAI_380008 ZP_10229445.1 Microcystis sp. T1-4 PC+PEI 2 196 08-22-2012
CpeU-I subfamily Ple7327_2703 YP_007081540.1 Pleurocapsa sp. PCC7327 PC+PEI 176 04-22-2013
CpeU-I subfamily GLO73106DRAFT_00035880 ZP_21049296.1 Gloeocapsa sp. PCC73106 PC+PEI 181 04-24-2013
CpeU-I subfamily Ple7327_1060 YP_007080032.1 Pleurocapsa sp. PCC7327 PC+PEI 195 04-24-2013
CpeU-I subfamily Mic7113_4742 YP_007123821.1 Microcoleus sp. PCC7113 PC+PEI 2 204 04-24-2013
CpeU-I subfamily Lepto7376_3000 YP_007072075.1 Leptolyngbya sp. PCC7376 PC+PEI 191 04-24-2013
CpeU-I subfamily ZP_18907671 ZP_18907671.1 Leptolyngbya sp. PCC7375 PC+PEI 2 196 04-24-2013
CpeU-I subfamily Cha6605_4060 YP_007098543.1 Chamaesiphon minutus PCC6605 PC+PEI 186 04-29-2013
CpeU-I subfamily Sta7437_0247 YP_007130830.1 Stanieria cyanosphaera PCC7437 PC+PEI 187 04-29-2013
CpeU-I subfamily Cal6303_1003 YP_007136040.1 Calothrix sp. PCC6303 PC+PEI 2 202 04-29-2013
CpeU-I subfamily Xen7305DRAFT_00018880 ZP_21056337.1 Xenococcus sp. PCC7305 PC+PEI 187 04-29-2013
CpeU-I subfamily Osc7112_1019 YP_007113993.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 196 04-29-2013
CpeU-I subfamily Pse7367_3939 YP_007083590.1 Pseudanabaena sp. PCC7367 PC+PEI 197 04-29-2013
CpeU-I subfamily Osc10802DRAFT_3769 Oscillatoria sp. PCC10802 PC+PEI 198 06-12-2013
CpeU-II subfamily sync_0492 YP_729719.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 200 11-25-2011
CpeU-II subfamily Syncc9605_0424 YP_380755.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 203 11-25-2011
CpeU-II subfamily SH8109_0086 ZP_05788514.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 203 11-25-2011
CpeU-II subfamily SYNW2019 NP_898110.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 204 11-25-2011
CpeU-II subfamily Syncc9902_1905 YP_377906.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 205 11-25-2011
CpeU-II subfamily BL107_08896 ZP_01469882.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 N-term extended (8 aa added) 205 09-17-2012
CpeU-II subfamily SynWH7803_0483 YP_001224206.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a possible alternative start would make the sequence 2 aa longer (MP) 201 09-17-2012
CpeU-II subfamily WH7805_06731 ZP_01123346.1 Synechococcus sp. WH7805 PC+PEI 2 N-term extended (8 aa added) 193 09-17-2012
CpeU-II subfamily RS9916_40166 ZP_01473076.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 N-term extended (10 aa added) 208 09-17-2012
CpeU-II subfamily SynRCC307_2060 YP_001228316.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 202 11-25-2011
CpeU-II subfamily SCB02_010100004388 ZP_07970147.1 Synechococcus sp. CB0205 PC+PEI 2 MIVEASFVVPMS not present in refseq 206 11-25-2011
CpeU-II subfamily Syn8016DRAFT_2746 ZP_08957399.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a N-term shortened by 22aa (METVPTFQSNGPMTVSDSSLEV) 204 11-25-2011
CpeU-II subfamily SynWH8020_CpeUII AAA27342.1 Synechococcus sp. WH8020 PC+PEI+PEII 3d/CA4 ORF200 in Wilbanks et al. (1993) 200 08-27-2012

Model strain Model strains, Marine strains

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