CyanoLyase

CC9902 strain

Lineage

  • Prokarya
    • Cyanobacteria
      • Chroococcales
        • Synechococcus
          • sp.

Strain information

Subcluster: 5.1

Clade/Ecotype: IV

Subclade: IVa

Phycobiliprotein types: PC+PEI+PEII

Pigment type: 3d/CA4

Habitat: marine

Genome sequence

Refseq record: NC_007513

Genome status: complete

Sequencing center: JGI

References

  • Dufresne et al., 2008. Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria Genome Biol, 9, R90.
  • Six et al., 2007. Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study Genome Biol, 8, R259.

Gene Locus tag Genbank Remark Length Last change
CpcS-II subfamily Syncc9902_0400 YP_376414.1 198 09-26-2011
CpeT family Syncc9902_1887 YP_377888.1 204 09-26-2011
CpeS-II subfamily Syncc9902_1886 YP_377887.1 178 09-26-2011
CpeU-II subfamily Syncc9902_1905 YP_377906.1 205 11-25-2011
CpeY family Syncc9902_1898 YP_377899.1 441 09-26-2011
CpeZ family Syncc9902_1897 YP_377898.1 209 09-26-2011
MpeU family Syncc9902_1896 YP_377897.1 298 10-25-2011
CpeF family Syncc9902_1901 YP_377902.1 293 10-25-2011
MpeY family Syncc9902_1892 YP_377893.1 398 09-26-2011
MpeZ family Syncc9902_1568 YP_377570.1 409 09-26-2011
RpcT family Syncc9902_1910 YP_377911.1 200 09-26-2011
IaiH family Syncc9902_0612 YP_376624.1 270 10-26-2011
CotB homologs 1 family Syncc9902_0166 YP_376184.1 203 09-26-2011
RpcE subfamily Syncc9902_1911 YP_377912.1 256 09-26-2011
RpcF subfamily Syncc9902_1912 YP_377913.1 210 09-26-2011
CpcU-II subfamily Syncc9902_1509 YP_377511.1 154 11-04-2011

Model strain Model strains, Marine strains

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