CyanoLyase

CpeS-II subfamily

Description

This subfamily contains all marine picocyanobacteria, except Prochlorococcus HL ecotypes the derived CpeS sequence of which was classified in a different subfamily (CpeS ProHL).

Gene Locus tag Genbank Species Strain PBP in rods Pigment type Remark Length Last change
CpeS-II subfamily sync_0510 YP_729737.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 179 09-26-2011
CpeS-II subfamily Syncc9605_0441 YP_380772.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 180 09-26-2011
CpeS-II subfamily SH8109_0064 ZP_05789382.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 180 09-26-2011
CpeS-II subfamily SYNW2002 NP_898093.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 180 09-26-2011
CpeS-II subfamily Syncc9902_1886 YP_377887.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily BL107_08991 ZP_01469901.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily SynWH7803_0499 YP_001224222.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 178 09-26-2011
CpeS-II subfamily WH7805_06671 ZP_01123334.1 Synechococcus sp. WH7805 PC+PEI 2 178 09-26-2011
CpeS-II subfamily RS9916_40271 ZP_01473097.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 178 09-26-2011
CpeS-II subfamily SynRCC307_2041 YP_001228297.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 177 09-26-2011
CpeS-II subfamily SCB02_010100004283 ZP_07970126.1 Synechococcus sp. CB0205 PC+PEI 2 177 11-04-2011
CpeS-II subfamily Syn8016DRAFT_2761 ZP_08957414.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 179 11-04-2011
CpeS-II subfamily NATL1_03911 YP_001014220.1 Prochlorococcus marinus NATL1A PEIII high b/a N-term extended (16 aa added) 177 08-28-2012
CpeS-II subfamily PMN2A_1677 YP_292868.1 Prochlorococcus marinus NATL2A PEIII high b/a 177 11-25-2011
CpeS-II subfamily Pro0343 NP_874737.1 Prochlorococcus marinus SS120 (CCMP1375) PEIII high b/a 181 11-25-2011
CpeS-II subfamily P9211_03381 YP_001550223.1 Prochlorococcus marinus MIT9211 PEIII High b/a 178 11-25-2011
CpeS-II subfamily P9303_22301 YP_001018230.1 Prochlorococcus sp. MIT9303 PEIII high b/a N-term extended: MNIEQFVDQSEGTWRS added by FP 177 09-26-2011
CpeS-II subfamily PMT1677 NP_895504.1 Prochlorococcus sp. MIT9313 PEIII high b/a 177 09-26-2011
CpeS-II subfamily SynWH8020_CpeSII Synechococcus sp. WH8020 PC+PEI+PEII 3d/CA4 From unpublished WH8020 genome 179 08-27-2012

Model strain Model strains, Marine strains

Biogenouest Station biologique de Roscoff ANR

Copyright © 2005-2012 Biogenouest® - Legal notice - Contact : Contact GenOuest

Hosted by the GenOuest bioinformatics platform