10D strain
[fasta] [gff] [only sure] [only unsure]
Lineage
- Eukarya
- Rhodophyta
- Cyanidioschyzon
- merolae
Strain information
Phycobiliprotein types: PC
Pigment type: 1
Habitat: thermophile
Genome sequence
Genome status: incomplete
Sequencing center: National Institute of Genetics, Japan
References
- Matsuzaki et al., 2004. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D Nature, 428, 653-657.
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS family | CMR092C | long N-term compared to cyanobacterial CpcS sequences, found by tblastn | 405 | 02-21-2012 | |
| CpcE-I subfamily | CMJ043C | Distantly related to cyanobacterial CpcE : many insertions in matching sequences and much longer N-term, found by tblastn | 516 | 02-21-2012 | |
| CpcF-I subfamily | CMJ044C | found by tblastn | 312 | 02-21-2012 | |
| CpcT family | CMK263C | found by tblastn | 263 | 02-21-2012 | |
| CotB homologs 2 family | CMS328C | on contig c19f0009, found by tblastn | 332 | 02-21-2012 | |
| CotB homologs 2 family | CMM226C | on contig c13f0002, found by tblastn | 420 | 02-21-2012 |
Model strains, Marine strains
Last update: 24 Aug 2012 18:19:04
