MBIC11017 strain

Also known as: AM1


  • Prokarya
    • Cyanobacteria
      • Chroococcales
        • Acaryochloris
          • marina

Strain information

Phycobiliprotein types: PC

Pigment type: 1

Habitat: marine

Remark: Chlorophyll d-producing cyanobacterium with phycobiliprotein aggregates but no phycobilisome. Close to CCMEE5410 strain.

Genome sequence

Refseq record: NC_009925

Genome status: complete

Sequencing center: TGen Sequencing Center


  • Mohr et al., 2010. A new chlorophyll d-containing cyanobacterium: evidence for niche adaptation in the genus Acaryochloris ISME J, 4, 1456-1469.

Gene Locus tag Genbank Remark Length Last change
CpcS family AM1_4215 YP_001518512.1 1st copy, strange position in phylogeny. By blast: closer from CpcSI. 197 08-20-2012
CpcS family AM1_C0217 YP_001521653.1 2nd copy,strange position in phylogeny. By blast: closer from CpcSI. Located on preb3 plasmid. 208 08-20-2012
CpcT family AM1_C0119 YP_001521565.1 on preb3 plasmid 197 09-26-2011
IaiH family AM1_2319 YP_001516644.1 252 10-26-2011
CpcE-I subfamily AM1_C0118 YP_001521564.1 on preb3 plasmid 274 09-26-2011
CpcF-I subfamily AM1_C0272 YP_001521703.1 on preb3 plasmid 217 09-26-2011
CotB homologs 2 family AM1_0043 YP_001514445.1 221 09-26-2011
L8106_16949 homologs family AM1_2983 YP_001517295.1 395 12-05-2011
CpcU-I subfamily AM1_5938 YP_001520196.1 N-term extended (22 aa added). Low blast and protomatch score with other CpcU-I sequences. 184 09-16-2012

Model strain Model strains, Marine strains

Biogenouest Station biologique de Roscoff ANR

Copyright © 2005-2012 Biogenouest® - Legal notice - Contact : Contact GenOuest

Hosted by the GenOuest bioinformatics platform