CyanoLyase

PCC6301 strain

Also known as: ATCC 27144

Lineage

  • Prokarya
    • Cyanobacteria
      • Chroococcales
        • Synechococcus
          • elongatus

Strain information

Subcluster: 1.1

Phycobiliprotein types: PC

Pigment type: 1

Habitat: freshwater

Remark: co-identical with PCC7942 except for a 186 bp inversion (Sugita et al, 2007)

Genome sequence

Refseq record: NC_006576

Sequencing center: Nagoya University

References

  • Sugita et al., 2007. Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization Photosynth Res, 93, 55-67.

Gene Locus tag Genbank Remark Length Last change
CpcS-I subfamily syc2064_d YP_172774.1 193 11-25-2011
CpcT family syc0738_d YP_171448.1 197 09-26-2011
CpcV family syc1149_c YP_171859.1 183 09-26-2011
IaiH family syc2339_d YP_173049.1 250 10-26-2011
CotB homologs 1 family syc1777_d YP_172487.1 225 09-26-2011
CpcE-I subfamily syc0494_c YP_171204.1 273 09-26-2011
CpcF-I subfamily syc0493_c YP_171203.1 207 09-26-2011
T homologs family syc0764_d YP_171474.1 197 09-26-2011
NblB family syc2271_d YP_172981.1 Blastp 221 09-26-2011
CpcS homologs family syc0383_d YP_171093.1 185 11-16-2011
CpcU-I subfamily syc1345_c YP_172055.1 N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. 180 09-16-2012
CotB homologs 2 family syc2370_d YP_173080.1 234 11-24-2011

Model strain Model strains, Marine strains

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