T homologs family
[fasta] [only sure] [only unsure]
Description
Members of the T clan, but function unknown. Called T homologs by Schluchter et al. (2010) and CpcT2 by Zhao et al. (2007).
Motif
A motif characterising this family is available.
References
- Schluchter et al., 2010. Phycobiliprotein Biosynthesis in Cyanobacteria: Structure and Function of Enzymes Involved in Post-translational Modification Adv Exp Med Biol, 675, 211-228.
- Zhao et al., 2007b. Lyase activities of CpcS- and CpcT-like proteins from Nostoc PCC7120 and sequential reconstitution of binding sites of phycoerythrocyanin and phycocyanin beta-subunits J Biol Chem, 282, 34093-34103.
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| T homologs family | CYB_0612 | YP_476863.1 | Synechococcus sp. | JA-2-3B'a(2-13) | PC | 1 | 195 | 09-26-2011 | |
| T homologs family | CYA_0661 | YP_474137.1 | Synechococcus sp. | JA-3-3Ab | PC | 1 | N-term shortened (19 aa removed) | 199 | 08-29-2012 |
| T homologs family | glr1538 | NP_924484.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 183 | 09-26-2011 | |
| T homologs family | MAE_10330 | YP_001656047.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | 200 | 09-26-2011 | |
| T homologs family | N9414_22063 | ZP_01629831.1 | Nodularia spumigena | CCY9414 | PC | 1 | 198 | 09-26-2011 | |
| T homologs family | alr0647 | NP_484691.1 | Anabaena (Nostoc) sp. | PCC7120 | PC+PEC | 198 | 09-26-2011 | ||
| T homologs family | Ava_4579 | YP_325071.1 | Anabaena variabilis | ATCC29413 (PCC7937) | PC+PEC | 198 | 09-27-2011 | ||
| T homologs family | L8106_17682 | ZP_01620258.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | 209 | 09-26-2011 | |
| T homologs family | Synpcc7942_0772 | YP_399791.1 | Synechococcus elongatus | PCC7942 | PC | 1 | 197 | 09-26-2011 | |
| T homologs family | syc0764_d | YP_171474.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 197 | 09-26-2011 | |
| T homologs family | Npun_R5170 | YP_001868445.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 201 | 09-26-2011 | |
| T homologs family | OSCI_2870005 | ZP_07111032.1 | Oscillatoria sp. | PCC6506 (PCC9029/ATCC29081 /UTEX 1547) | PC | 1 | 206 | 10-19-2011 | |
| T homologs family | ZP_08491083.1 | ZP_08491083.1 | Microcoleus vaginatus | FGP-2 | PC | 1 | 206 | 10-20-2011 | |
| T homologs family | IPF_874 | CAO87946.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | 200 | 10-20-2011 | |
| T homologs family | FJSC11DRAFT_4093 | ZP_08987885.1 | Fischerella sp. (Mastigocladus laminosus) | JSC-11 | PC+PEC | 198 | 11-24-2011 | ||
| T homologs family | PCC7424_5176 | YP_002380394.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 210 | 11-24-2011 | |
| T homologs family | S7335_1475 | ZP_05035043.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 210 | 11-24-2011 | |
| T homologs family | Cyan7822_5227 | YP_003890383.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 207 | 11-24-2011 | |
| T homologs family | GL6909_6291 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | N-term shortened (13 aa removed) | 212 | 08-29-2012 | |
| T homologs family | MICAI_2100008 | ZP_10227599.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 200 | 08-22-2012 | |
| T homologs family | MICAG_1020006 | CCI20806.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 200 | 08-22-2012 | |
| T homologs family | MICAB_1760004 | CCH96240.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 200 | 08-23-2012 | |
| T homologs family | MICAK_3630005 | CCI37921.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 200 | 08-23-2012 | |
| T homologs family | MICAC_360009 | CCI02645.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 200 | 08-23-2012 | |
| T homologs family | MICAD_2450009 | CCI07316.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 200 | 08-23-2012 | |
| T homologs family | Ple7327_0912 | YP_007079893.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 204 | 04-24-2013 | ||
| T homologs family | Nos7524_0185 | YP_007073704.1 | Nostoc sp. | PCC7524 | PC+PEC | 197 | 04-24-2013 | ||
| T homologs family | Mic7113_5401 | YP_007124450.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 204 | 04-24-2013 | |
| T homologs family | Osc7112_2172 | YP_007115053.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 206 | 04-24-2013 | |
| T homologs family | O53_4441 | ZP_20935237.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 200 | 04-24-2013 | |
| T homologs family | Glo7428_3236 | YP_007128882.1 | Gloeocapsa sp. | PCC7428 | PC | 195 | 04-24-2013 | ||
| T homologs family | Cylst_3179 | YP_007148022.1 | Cylindrospermum stagnale | PCC7417 | PC+PEC | 201 | 04-24-2013 | ||
| T homologs family | GLO73106DRAFT_00006440 | ZP_21052220.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 191 | 04-24-2013 | ||
| T homologs family | Anacy_3757 | YP_007158048.1 | Anabaena cylindrica | PCC7122 | PC+PEC | 198 | 04-24-2013 | ||
| T homologs family | Riv7116_2555 | YP_007055610.1 | Rivularia sp. | PCC7116 | PC+PEC | 197 | 04-24-2013 | ||
| T homologs family | Chro_5214 | YP_007094453.1 | Chroococcidiopsis thermalis | PCC7203 | PC+PEC | 192 | 04-24-2013 | ||
| T homologs family | Pse7367_0409 | YP_007101148.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 211 | 04-24-2013 | ||
| T homologs family | Nos7107_2518 | YP_007050272.1 | Nostoc sp. | PCC7107 | PC+PEC | 205 | 04-29-2013 | ||
| T homologs family | MICCA_410007 | ZP_18814723.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 200 | 04-29-2013 | |
| T homologs family | Cri9333_0938 | YP_007141363.1 | Crinalium epipsammum | PCC9333 | PC | 204 | 04-29-2013 | ||
| T homologs family | Oscil6304_2635 | YP_007086171.1 | Oscillatoria acuminata | PCC6304 (SAG 1449-3) | PC | 211 | 04-29-2013 | ||
| T homologs family | Cal7507_3805 | YP_007067027.1 | Calothrix sp. | PCC7507 | PC+PEC | 198 | 04-29-2013 | ||
| T homologs family | Sta7437_0279 | YP_007130860.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 204 | 04-29-2013 | ||
| T homologs family | Cal6303_5596 | YP_007140445.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 200 | 04-29-2013 | |
| T homologs family | GEI7407_0107 | YP_007107664.1 | Geitlerinema sp. | PCC7407 | PC | 205 | 04-29-2013 | ||
| T homologs family | Syn7502_02541 | YP_007106647.1 | Synechococcus sp. | PCC7502 | PC | 192 | 04-29-2013 | ||
| T homologs family | LepboDRAFT_0515 | Leptolyngbya boryana | PCC6306 | PC | 206 | 06-11-2013 | |||
| T homologs family | Fis9431DRAFT_3896 | Fischerella sp. | PCC9431 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | FIS9605DRAFT_06923 | Fischerella sp. | PCC9605 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | FisPCC73103_1901 | Fischerella muscicola | PCC73103 (SAG 1427-1) | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | Scytonema_PCC7110_joined_9421 | Scytonema hofmanni | PCC7110 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | Osc10802DRAFT_3893 | Oscillatoria sp. | PCC10802 | PC+PEI | 206 | 06-12-2013 | |||
| T homologs family | PCC9339DRAFT_02143 | Fischerella sp. | PCC9339 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | Ana7108_4437 | Anabaena sp. | PCC7108 | PC+PEC | 193 | 06-12-2013 | |||
| T homologs family | Chloroglopsis_PCC9212_joined_6497 | Chlorogloeopsis sp. | PCC9212 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | UYC_00416 | Chlorogloeopsis fritschii | PCC6912 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | FisPCC7414_2376 | Fischerella muscicola | PCC7414 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | Fischerella_sp._PCC7521_3137 | Fischerella thermalis | PCC7521 | PC+PEC | 198 | 06-12-2013 | |||
| T homologs family | Syn6312_3060 | YP_007062655.1 | Synechococcus sp. | PCC6312 | PC | 192 | 06-12-2013 | ||
| T homologs family | Dacsa_0162 | YP_007170334.1 | Dactylococcopsis salina | PCC8305 | 193 | 06-20-2013 | |||
| T homologs family | PCC7418_1479" | YP_007167882.1 | Halothece sp. | PCC7418 | PC | 197 | 06-20-2013 | ||
| T homologs family | Lep6406DRAFT_00020880 | ZP_21046681.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 208 | 06-20-2013 | ||
| T homologs family | Pse7429DRAFT_4531 | ZP_21068402.1 | Pseudanabaena sp. (biceps) | PCC7429 | PC | N-term shortened (28 aa) | 203 | 07-02-2013 |
Model strains, Marine strains
Last update: 29 Aug 2012 18:57:32
