CpeZ family
[fasta] [only sure] [only unsure]
Description
CpeZ enhances the activity of CpeY. CpeYZ is involved in the attachment of PEB at Cys-82 alpha-PE (CpeA). CpeY alone, but not CpeZ can ligate PEB to CpeA, but with a reduced yield than CpeY and CpeZ together (Biswas et al., 2011). More recently Kronfel et al. (2019) showed that CpeZ acts as a chaperone-like protein, assisting in the folding/stability of PE subunits, allowing bilin lyases such as CpeY and CpeS to attach PEB to their PE subunit.
Motif
A motif characterising this family is available.
References
- Biswas et al., 2011. Characterization of the activities of the CpeY, CpeZ, and CpeS bilin lyases in phycoerythrin biosynthesis in Fremyella diplosiphon strain UTEX 481 J Biol Chem, 286(41), 35509-21.
- Kahn et al., 1997. A role for cpeYZ in cyanobacterial phycoerythrin biosynthesis J Bacteriol, 179, 998-1006.
- Kronfel et al., 2019. The roles of the chaperone-like protein CpeZ and the phycoerythrobilin lyase CpeY in phycoerythrin biogenesis Biochim Biophys Acta Bioenerg, 1860, 549-56.
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpeZ family | sync_0500 | YP_729727.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | N-term shortened (15aa removed by FP: LLLSPAKIVKSSSCV) | 208 | 09-26-2011 |
| CpeZ family | Syncc9605_0430 | YP_380761.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 212 | 09-26-2011 | |
| CpeZ family | SH8109_0079 | ZP_05789880.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 212 | 09-26-2011 | |
| CpeZ family | SYNW2012 | NP_898103.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 206 | 09-26-2011 | |
| CpeZ family | Syncc9902_1897 | YP_377898.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 209 | 09-26-2011 | |
| CpeZ family | BL107_08936 | ZP_01469890.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | 209 | 09-26-2011 | |
| CpeZ family | SynWH7803_0488 | YP_001224211.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | 205 | 09-26-2011 | |
| CpeZ family | WH7805_06706 | ZP_01123341.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | 209 | 09-26-2011 | |
| CpeZ family | RS9916_40216 | ZP_01473086.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | 209 | 09-26-2011 | |
| CpeZ family | SynRCC307_2052 | YP_001228308.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 205 | 09-26-2011 | |
| CpeZ family | SCB02_010100004363 | ZP_07970142.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | 204 | 11-04-2011 | |
| CpeZ family | S7335_2652 | ZP_05036218.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 209 | 09-26-2011 | |
| CpeZ family | Syn8016DRAFT_2750 | ZP_08957403.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | 204 | 11-04-2011 | |
| CpeZ family | NATL1_03871 | YP_001014216.1 | Prochlorococcus marinus | NATL1A | PEIII | high b/a | 198 | 09-26-2011 | |
| CpeZ family | PMN2A_1673 | YP_292864.1 | Prochlorococcus marinus | NATL2A | PEIII | high b/a | 198 | 09-26-2011 | |
| CpeZ family | Pro0339 | NP_874733.1 | Prochlorococcus marinus | SS120 (CCMP1375) | PEIII | high b/a | A block is missing in protomata | 202 | 09-26-2011 |
| CpeZ family | P9211_03341 | YP_001550219.1 | Prochlorococcus marinus | MIT9211 | PEIII | High b/a | A block is missing in protomata | 200 | 09-26-2011 |
| CpeZ family | P9303_22361 | YP_001018236.1 | Prochlorococcus sp. | MIT9303 | PEIII | high b/a | 210 | 09-26-2011 | |
| CpeZ family | PMT1681 | NP_895508.1 | Prochlorococcus sp. | MIT9313 | PEIII | high b/a | 211 | 09-26-2011 | |
| CpeZ family | CwatDRAFT_5981 | ZP_00514214.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 204 | 09-26-2011 | ||
| CpeZ family | PCC7424_5730 | YP_002381025.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 201 | 09-26-2011 | |
| CpeZ family | PCC8801_4513 | YP_002364791.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 208 | 09-26-2011 | |
| CpeZ family | Cyan7822_4046 | YP_003889246.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 201 | 09-26-2011 | |
| CpeZ family | gi|47606673|gb|AAT36319.1| | AAT36319.1 | Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) | Fd33 (UTEX481/PCC7601) | PC+PEI | CA3 | 205 | 09-26-2011 | |
| CpeZ family | gvip157 | NP_924133.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 204 | 11-24-2011 | |
| CpeZ family | GL6909_3531 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 204 | 06-06-2011 | ||
| CpeZ family | Npun_R3805 | YP_001867132.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 202 | 09-26-2011 | |
| CpeZ family | Tery_0995 | YP_720846.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | lower blastp hit on >Tery_0980 | 203 | 09-26-2011 | |
| CpeZ family | Tery_0980 | YP_720834.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | Blastp hit on cpeZ (but lower than >Tery_0995) | 219 | 09-26-2011 | |
| CpeZ family | LYNGBM3L_56070 | ZP_08427728.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 220 | 10-19-2011 | |
| CpeZ family | CAJ73184.1| | CAJ73184.1 | Guillardia theta | CCMP2712 | Cr-PE 545 | n.a. | Low protoscan score | 229 | 10-28-2011 |
| CpeZ family | CwatDRAFT_0406 | ZP_00518848.1 | Crocosphaera watsonii | WH8501 | PC+PEI | Low score, similar to Tery_0980 (IMS101) | 219 | 12-02-2011 | |
| CpeZ family | CWATWH0003_0668 | EHJ14660.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 204 | 02-22-2012 | ||
| CpeZ family | CWATWH0003_5315a1 | EHJ09924.1 | Crocosphaera watsonii | WH0003 | PC+PEI | Incomplete, 2nd copy? | 186 | 02-22-2012 | |
| CpeZ family | MICAI_2660036 | ZP_10228479.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 203 | 08-22-2012 | |
| CpeZ family | SynWH8020_cpeZ | AAA27336.1 | Synechococcus sp. | WH8020 | PC+PEI+PEII | 3dA/CA4-A | N-term extended (22 aa added) | 208 | 08-27-2012 |
| CpeZ family | Mic7113_4747 | YP_007123826.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 204 | 04-23-2013 | |
| CpeZ family | Ple7327_1946 | YP_007080845.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 202 | 04-23-2013 | ||
| CpeZ family | Osc7112_1034 | YP_007114008.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 204 | 04-23-2013 | |
| CpeZ family | GLO73106DRAFT_00012690 | ZP_21051605.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 204 | 04-23-2013 | ||
| CpeZ family | Pse7367_3889 | YP_007083546.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 206 | 04-23-2013 | ||
| CpeZ family | Lepto7376_1198 | YP_007070389.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 202 | 04-23-2013 | ||
| CpeZ family | Xen7305DRAFT_00032340 | ZP_21054999.1 | Xenococcus sp. | PCC7305 | PC+PEI | 209 | 04-23-2013 | ||
| CpeZ family | Sta7437_3350 | YP_007133822.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 202 | 04-29-2013 | ||
| CpeZ family | Cha6605_4052 | YP_007098535.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 204 | 04-29-2013 | ||
| CpeZ family | Cal6303_1006 | YP_007136043.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 202 | 04-29-2013 | |
| CpeZ family | Osc10802DRAFT_5371 | Oscillatoria sp. | PCC10802 | PC+PEI | This sequence has a long N-term which has similarity to C-term end of CpeC (possible sequencing/assembly error) | 281 | 07-02-2013 | ||
| CpeZ family | ZP_18907654 | ZP_18907654.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 205 | 06-20-2013 |
Model strains, Marine strains
Last update: 20 Apr 2023 9:38:50
