CyanoLyase

CpcF/RpcF family

Description

No description.

Gene Locus tag Genbank Species Strain PBP in rods Pigment type Remark Length Last change
CpcF/RpcF family WH7805_06761 ZP_01123352.1 Synechococcus sp. WH7805 PC+PEI 2 Unclear whether this strain has CpcE/F or RpcE/F. Two possibilities:
a-84 and b-84 = PCB; b-155 = PEB
a-84 = PEB,b-84 and b-155 = PCB
212 12-06-2011
CpcF/RpcF family SynRCC307_2067 YP_001228323.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b Unclear whether this strain has CpcE/F or RpcE/F 218 12-06-2011
CpcF/RpcF family S7335_4405 ZP_05037964.1 Synechococcus sp. PCC7335 PC+PEI CA3 CpcFII or RpcF 225 12-06-2011
CpcF-I subfamily alr0533 NP_484577.1 Anabaena (Nostoc) sp. PCC7120 PC+PEC 200 12-06-2011
CpcF-I subfamily CwatDRAFT_6054 ZP_00513615.1 Crocosphaera watsonii WH8501 PC+PEI Not clustered with cpcE-I. This strain also possesses an RpcG-like sequence which should act on the same alpha-PC binding site as CpcE/F. 194 10-30-2012
CpcF-I subfamily L8106_02272 ZP_01619123.1 Lyngbya aestuarii CCY9616 (PCC8106/CCY8106) PC 1 211 09-26-2011
CpcF-I subfamily MC7420_3666 ZP_05028410.1 Microcoleus chthonoplastes PCC7420 PC+PEC 216 12-06-2011
CpcF-I subfamily N9414_13265 ZP_01631845.1 Nodularia spumigena CCY9414 PC 1 198 09-26-2011
CpcF-I subfamily SYNPCC7002_A2214 YP_001735450.1 Synechococcus sp. PCC7002 PC 1 213 09-26-2011
CpcF-I subfamily sll1051 NP_439974.1 Synechocystis sp. PCC6803 (ATCC27184) PC 1 214 09-26-2011
CpcF-I subfamily AM1_C0272 YP_001521703.1 Acaryochloris marina MBIC11017 (AM1) PC 1 on preb3 plasmid 217 09-26-2011
CpcF-I subfamily Ava_2935 YP_323441.1 Anabaena variabilis ATCC29413 (PCC7937) PC+PEC 200 12-06-2011
CpcF-I subfamily Aazo_3484 YP_003722224.1 Anabaena (Nostoc) azollae 0708 PC+PEC 203 12-06-2011
CpcF-I subfamily AmaxDRAFT_0380 ZP_03271563.1 Arthrospira (Spirulina) maxima CS-328 PC 1 210 09-26-2011
CpcF-I subfamily cce_2308 YP_001803724.1 Cyanothece sp. ATCC51142 PC 1 215 09-26-2011
CpcF-I subfamily PCC7424_0661 YP_002375988.1 Cyanothece sp. PCC7424 PC+PEI 2 215 12-06-2011
CpcF-I subfamily Cyan7425_1691 YP_002482421.1 Cyanothece sp. PCC7425 PC 1 209 09-26-2011
CpcF-I subfamily PCC8801_3073 YP_002373210.1 Cyanothece sp. PCC8801 PC+PEI 2 215 12-06-2011
CpcF-I subfamily Cyan8802_3047 YP_003138728.1 Cyanothece sp. PCC8802 PC 1 215 09-26-2011
CpcF-I subfamily CY0110_25371 ZP_01730772.1 Cyanothece sp. CCY0110 PC 1 220 09-26-2011
CpcF-I subfamily Cyan7822_2446 YP_003887696.1 Cyanothece sp. PCC7822 PC+PEI 2 226 12-06-2011
CpcF-I subfamily gi|111610621|gb|ABH11708.1| ABH11708.1 Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) Fd33 (UTEX481/PCC7601) PC+PEI CA3 273 12-06-2011
CpcF-I subfamily FJSC11DRAFT_0791 ZP_08984585.1 Fischerella sp. (Mastigocladus laminosus) JSC-11 PC+PEC 205 12-06-2011
CpcF-I subfamily gvip186 NP_924215.1 Gloeobacter violaceus PCC7421 PC+PEI 2 193 12-06-2011
CpcF-I subfamily GL6909_0679 Gloeothece sp. PCC6909/1 PC+PEI 2 220 12-06-2011
CpcF-I subfamily MAE_27950 YP_001657809.1 Microcystis aeruginosa NIES-843 PC 1 207 09-26-2011
CpcF-I subfamily Npun_F5295 YP_001868559.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 241 12-06-2011
CpcF-I subfamily Synpcc7942_1055 YP_400072.1 Synechococcus elongatus PCC7942 PC 1 207 09-26-2011
CpcF-I subfamily syc0493_c YP_171203.1 Synechococcus elongatus PCC6301 (ATCC 27144) PC 1 207 09-26-2011
CpcF-I subfamily CYB_0943 YP_477185.1 Synechococcus sp. JA-2-3B'a(2-13) PC 1 N-term shortened: 16 aa removed by FP (MPLISGFKCTFDYSLP) 213 09-26-2011
CpcF-I subfamily CYA_0216 YP_473703.1 Synechococcus sp. JA-3-3Ab PC 1 N-term shortened: 25 aa removed by FP (MGLSPPIGSLGCFVSFLLTLASGLS) 213 09-26-2011
CpcF-I subfamily tlr1962 NP_682752.1 Thermosynechococcus elongatus BP-1 PC 1 213 09-26-2011
CpcF-I subfamily Tery_5046 YP_724427.1 Trichodesmium erythraeum IMS101 PC+PEI We thought it was RpcF, why? 214 12-06-2011
CpcF-I subfamily CRD_01231 ZP_06304368.1 Raphidiopsis brookii D9 PC 1 216 12-06-2011
CpcF-I subfamily PCC_0624 YP_002049260.1 Paulinella chromatophora M0880 PC 1 224 12-05-2011
CpcF-I subfamily CRC_01963 ZP_06308543.1 Cylindrospermopsis raciborskii CS-505 PC 1 216 10-19-2011
CpcF-I subfamily OSCI_2780026 ZP_07110958.1 Oscillatoria sp. PCC6506 (PCC9029/ATCC29081 /UTEX 1547) PC 1 209 10-19-2011
CpcF-I subfamily LYNGBM3L_16650 ZP_08428231.1 Lyngbya majuscula 3L PC+PEI 2 212 10-19-2011
CpcF-I subfamily ZP_08490942.1 ZP_08490942.1 Microcoleus vaginatus FGP-2 PC 1 208 10-20-2011
CpcF-I subfamily IPF_4758 CAO90472.1 Microcystis aeruginosa PCC7806 PC 1 207 10-20-2011
CpcF-I subfamily NIES39_D02000 BAI89620.1 Arthrospira (Spirulina) platensis NIES-39 PC 1 210 10-20-2011
CpcF-I subfamily CMJ044C Cyanidioschyzon merolae 10D PC 1 found by tblastn 312 02-21-2012
CpcF-I subfamily Cy51472DRAFT_1994 ZP_08973198.1 Cyanothece sp. ATCC51472 PC 1 215 01-10-2012
CpcF-I subfamily AplaP_010100003292 ZP_06380691.1 Arthrospira (Spirulina) platensis Paraca PC 1 210 01-24-2012
CpcF-I subfamily CWATWH0003_3385 EHJ11901.1 Crocosphaera watsonii WH0003 PC+PEI 212 02-22-2012
CpcF-I subfamily MICAI_2630009 ZP_10228402.1 Microcystis sp. T1-4 PC+PEI 2 207 08-22-2012
CpcF-I subfamily MICAG_2680028 CCI25051.1 Microcystis aeruginosa PCC9808 PC 1 207 08-22-2012
CpcF-I subfamily MICAB_5440002 CCH98840.1 Microcystis aeruginosa PCC9717 PC 1 207 08-23-2012
CpcF-I subfamily MICAK_2510015 CCI36533.1 Microcystis aeruginosa PCC9701 PC 1 207 08-23-2012
CpcF-I subfamily MICAC_4070001 CCI03038.1 Microcystis aeruginosa PCC9443 PC 1 207 08-23-2012
CpcF-I subfamily MICCA_2150045 ZP_18816833.1 Microcystis aeruginosa PCC9432 PC 1 207 04-22-2013
CpcF-I subfamily MICAD_1110027 CCI05522.1 Microcystis aeruginosa PCC7941 PC 1 207 08-23-2012
CpcF-I subfamily Osc7112_2003 YP_007114893.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 208 04-23-2013
CpcF-I subfamily Ple7327_3797 YP_007082522.1 Pleurocapsa sp. PCC7327 PC+PEI 240 04-23-2013
CpcF-I subfamily Nos7524_4178 YP_007077541.1 Nostoc sp. PCC7524 PC+PEC 200 04-23-2013
CpcF-I subfamily ZP_18907677 ZP_18907677.1 Leptolyngbya sp. PCC7375 PC+PEI 2 213 04-23-2013
CpcF-I subfamily Mic7113_2594 YP_007121793.1 Microcoleus sp. PCC7113 PC+PEI 2 213 04-23-2013
CpcF-I subfamily ZP_20932486 ZP_20932486.1 Microcystis aeruginosa TAIHU98 PC 1 207 04-23-2013
CpcF-I subfamily Cylst_0756 YP_007145763.1 Cylindrospermum stagnale PCC7417 PC+PEC 200 04-23-2013
CpcF-I subfamily Anacy_1901 YP_007156299.1 Anabaena cylindrica PCC7122 PC+PEC 200 04-23-2013
CpcF-I subfamily Glo7428_4601 YP_007130197.1 Gloeocapsa sp. PCC7428 PC 208 04-23-2013
CpcF-I subfamily Lepto7376_2326 YP_007071447.1 Leptolyngbya sp. PCC7376 PC+PEI 221 04-23-2013
CpcF-I subfamily Cyast_1932 YP_007165534.1 Cyanobacterium stanieri PCC7202 PC 213 04-23-2013
CpcF-I subfamily Riv7116_3560 YP_007056559.1 Rivularia sp. PCC7116 PC+PEC 206 04-23-2013
CpcF-I subfamily Pse7429DRAFT_3558 ZP_21066938.1 Pseudanabaena sp. (biceps) PCC7429 PC 282 04-23-2013
CpcF-I subfamily Xen7305DRAFT_00020290 ZP_21056139.1 Xenococcus sp. PCC7305 PC+PEI 206 04-23-2013
CpcF-I subfamily GLO73106DRAFT_00012730 ZP_21051609.1 Gloeocapsa sp. PCC73106 PC+PEI 219 04-23-2013
CpcF-I subfamily Chro_3412 YP_007092740.1 Chroococcidiopsis thermalis PCC7203 PC+PEC 212 04-23-2013
CpcF-I subfamily Cal6303_3400 YP_007138307.1 Calothrix sp. PCC6303 PC+PEI 2 241 04-29-2013
CpcF-I subfamily Cha6605_3627 YP_007098137.1 Chamaesiphon minutus PCC6605 PC+PEI 269 04-29-2013
CpcF-I subfamily Lep6406DRAFT_00020740 ZP_21046667.1 Leptolyngbya sp. PCC6406 PC+PEC 237 04-29-2013
CpcF-I subfamily Cal7507_3704 YP_007066929.1 Calothrix sp. PCC7507 PC+PEC 200 04-29-2013
CpcF-I subfamily Oscil6304_1240 YP_007084875.1 Oscillatoria acuminata PCC6304 (SAG 1449-3) PC 217 04-29-2013
CpcF-I subfamily Nos7107_3140 YP_007050880.1 Nostoc sp. PCC7107 PC+PEC 199 04-29-2013
CpcF-I subfamily LepboDRAFT_3197 Leptolyngbya boryana PCC6306 PC 271 06-11-2013
CpcF-I subfamily Fis9431DRAFT_3457 Fischerella sp. PCC9431 PC+PEC 212 06-12-2013
CpcF-I subfamily FIS9605DRAFT_06543 Fischerella sp. PCC9605 PC+PEC 207 06-12-2013
CpcF-I subfamily FisPCC73103_3438 Fischerella muscicola PCC73103 (SAG 1427-1) PC+PEC 212 06-12-2013
CpcF-I subfamily Scytonema_PCC7110_joined_1635 Scytonema hofmanni PCC7110 PC+PEC 206 06-12-2013
CpcF-I subfamily Osc10802DRAFT_3758 Oscillatoria sp. PCC10802 PC+PEI N-term shortened (17 aa) 218 07-02-2013
CpcF-I subfamily PCC9339DRAFT_01807 Fischerella sp. PCC9339 PC+PEC 212 06-12-2013
CpcF-I subfamily Ana7108_1539 Anabaena sp. PCC7108 PC+PEC 198 06-12-2013
CpcF-I subfamily Chloroglopsis_PCC9212_joined_2969 Chlorogloeopsis sp. PCC9212 PC+PEC 201 06-12-2013
CpcF-I subfamily UYC_06434 Chlorogloeopsis fritschii PCC6912 PC+PEC 201 06-12-2013
CpcF-I subfamily FisPCC7414_3830 Fischerella muscicola PCC7414 PC+PEC 207 06-12-2013
CpcF-I subfamily Fischerella_sp._PCC7521_722 Fischerella thermalis PCC7521 PC+PEC 205 06-12-2013
CpcF-I subfamily Cyan10605_2164 YP_007162294.1 Cyanobacterium aponimum PCC10605 218 06-12-2013
CpcF-I subfamily Syn6312_2504 YP_007062147.1 Synechococcus sp. PCC6312 PC 225 06-12-2013
CpcF-I subfamily Pse7367_3925 YP_007083577.1 Pseudanabaena sp. PCC7367 PC+PEI 256 06-20-2013
CpcF-I subfamily GEI7407_3505 YP_007111024.1 Geitlerinema sp. PCC7407 PC 229 06-20-2013
CpcF-I subfamily PCC7418_1993 YP_007168373.1 Halothece sp. PCC7418 PC 196 06-20-2013
CpcF-I subfamily Dacsa_0415 YP_007142210.1 Crinalium epipsammum PCC9333 PC 206 06-20-2013
CpcF-I subfamily Dacsa_0415 YP_007170561.1 Dactylococcopsis salina PCC8305 206 06-20-2013
CpcF-I subfamily Syn7509DRAFT_00024760 ZP_21041084.1 Synechocystis sp. PCC7509 PC 206 06-20-2013
CpcF-I subfamily Syn7502_03300 YP_007107301.1 Synechococcus sp. PCC7502 PC 210 06-20-2013
CpcF-I subfamily Sta7437_0255 YP_007130838.1 Stanieria cyanosphaera PCC7437 PC+PEI 228 06-20-2013
CpcF-II subfamily SCB01_010100012947 ZP_07974571.1 Synechococcus sp. CB0101 PC 1 220 12-06-2011
CpcF-II subfamily SCB02_010100004420 ZP_07970153.1 Synechococcus sp. CB0205 PC+PEI 2 N-term possibly 5aa too long 228 12-06-2011
CpcF-II subfamily RS9917_02913 ZP_01080765.1 Synechococcus sp. RS9917 PC 1 219 12-06-2011
CpcF-II subfamily WH5701_05885 ZP_01083797.1 Synechococcus sp. WH5701 PC 1 222 12-06-2011
CpcF-II subfamily CPCC7001_1598 ZP_05045410.1 Cyanobium sp. PCC7001 PC 1 223 12-06-2011
CpcF-II subfamily Cyagr_1641 YP_007046133.1 Cyanobium gracile PCC6307 PC 220 04-29-2013
RpcF subfamily sync_0485 YP_729712.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 209 09-26-2011
RpcF subfamily SH8109_0093 ZP_05790743.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b Sequence was incomplete (updated by FP) 210 12-05-2011
RpcF subfamily Syncc9902_1912 YP_377913.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 210 09-26-2011
RpcF subfamily SynWH7803_0476 YP_001224199.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 210 09-26-2011
RpcF subfamily Syn8016DRAFT_2739 ZP_08957392.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 211 11-04-2011
RpcF subfamily SynWH8020_rpcF AAA27349.1 Synechococcus sp. WH8020 PC+PEI+PEII 3d/CA4 209 08-26-2012

Model strain Model strains, Marine strains

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