CyanoLyase

CpcU family

Description

CpcU proteins form heterodimers with some CpcS types

Gene Locus tag Genbank Species Strain PBP in rods Pigment type Remark Length Last change
CpcU-I subfamily SYNPCC7002_A2053 YP_001735295.1 Synechococcus sp. PCC7002 PC 1 183 09-26-2011
CpcU-I subfamily Sll0853 NP_441116.1 Synechocystis sp. PCC6803 (ATCC27184) PC 1 N-term shortened (11 aa removed: MKPVAPRSFFA) 175 09-16-2012
CpcU-I subfamily AmaxDRAFT_1245 ZP_03272427.1 Arthrospira (Spirulina) maxima CS-328 PC 1 Fairly low blast score to other CpcU-I sequences. 172 09-16-2012
CpcU-I subfamily CwatDRAFT_4215 ZP_00515818.1 Crocosphaera watsonii WH8501 PC+PEI 175 09-26-2011
CpcU-I subfamily cce_3775 YP_001805189.1 Cyanothece sp. ATCC51142 PC 1 N-term shortened (2 aa removed: MF) 175 09-16-2012
CpcU-I subfamily PCC7424_0571 YP_002375901.1 Cyanothece sp. PCC7424 PC+PEI 2 172 09-26-2011
CpcU-I subfamily PCC8801_1382 YP_002371598.1 Cyanothece sp. PCC8801 PC+PEI 2 176 09-26-2011
CpcU-I subfamily Cyan8802_1416 YP_003137168.1 Cyanothece sp. PCC8802 PC 1 176 09-26-2011
CpcU-I subfamily CY0110_18677 ZP_01727104.1 Cyanothece sp. CCY0110 PC 1 175 09-26-2011
CpcU-I subfamily Cyan7822_1691 YP_003886955.1 Cyanothece sp. PCC7822 PC+PEI 2 172 09-26-2011
CpcU-I subfamily glr1614 NP_924560.1 Gloeobacter violaceus PCC7421 PC+PEI 2 212 09-26-2011
CpcU-I subfamily GL6909_0312 Gloeothece sp. PCC6909/1 PC+PEI 2 172 05-31-2011
CpcU-I subfamily L8106_16679 ZP_01620367.1 Lyngbya aestuarii CCY9616 (PCC8106/CCY8106) PC 1 176 09-26-2011
CpcU-I subfamilyMAE_56790 YP_001660693.1 Microcystis aeruginosa NIES-843 PC 1 170 09-26-2011
CpcU-I subfamily Npun_R1154 YP_001864823.1 Nostoc punctiforme ATCC29133 (PCC73102) PC+PEI 2 188 09-26-2011
CpcU-I subfamily Synpcc7942_0161 YP_399180.1 Synechococcus elongatus PCC7942 PC 1 N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. 180 09-16-2012
CpcU-I subfamily Tery_3198 YP_722794.1 Trichodesmium erythraeum IMS101 PC+PEI 174 09-26-2011
CpcU-I subfamily OSCI_1150017 ZP_07109767.1 Oscillatoria sp. PCC6506 (PCC9029/ATCC29081 /UTEX 1547) PC 1 192 10-19-2011
CpcU-I subfamily LYNGBM3L_17960 ZP_08426426.1 Lyngbya majuscula 3L PC+PEI 2 Protomata tells it is CpcU.
Blast tells it is CpcSIII (but with a 17aa gap)
190 10-19-2011
CpcU-I subfamily MicvaDRAFT_5310 ZP_08492814.1 Microcoleus vaginatus FGP-2 PC 1 169 10-20-2011
CpcU-I subfamily IPF_3445 CAO90549.1 Microcystis aeruginosa PCC7806 PC 1 171 10-20-2011
CpcU-I subfamily NIES39_R01090 BAI94418.1 Arthrospira (Spirulina) platensis NIES-39 PC 1 174 10-20-2011
CpcU-I subfamily syc1345_c YP_172055.1 Synechococcus elongatus PCC6301 (ATCC 27144) PC 1 N-term possibly 12 aa too long (MGDSKGRVASAA). Fairly low blast score to other CpcU-I sequences. 180 09-16-2012
CpcU-I subfamily AM1_5938 YP_001520196.1 Acaryochloris marina MBIC11017 (AM1) PC 1 N-term extended (22 aa added). Low blast and protomatch score with other CpcU-I sequences. 184 09-16-2012
CpcU-I subfamily Cy51472DRAFT_2075 ZP_08973279.1 Cyanothece sp. ATCC51472 PC 1 175 01-10-2012
CpcU-I subfamily AplaP_010100016770 ZP_06383329.1 Arthrospira (Spirulina) platensis Paraca PC 1 174 01-24-2012
CpcU-I subfamily ACCM5_010100021921 ZP_09249963.1 Acaryochloris sp. CCMEE5410 APC only 184 01-24-2012
CpcU-I subfamily CWATWH0003_2252 EHJ13063.1 Crocosphaera watsonii WH0003 175 02-22-2012
CpcU-I subfamily MICAI_560047 ZP_10229859.1 Microcystis sp. T1-4 PC+PEI 2 170 08-22-2012
CpcU-I subfamily MICAG_930008 CCI29657.1 Microcystis aeruginosa PCC9808 PC 1 170 08-22-2012
CpcU-I subfamily MICAB_5520008 CCH98898.1 Microcystis aeruginosa PCC9717 PC 1 170 08-23-2012
CpcU-I subfamily MICAK_3340003 CCI37521.1 Microcystis aeruginosa PCC9701 PC 1 170 08-23-2012
CpcU-I subfamily MICAC_1120009 CCI00723.1 Microcystis aeruginosa PCC9443 PC 1 171 08-23-2012
CpcU-I subfamily MICAD_2540005 CCI07478.1 Microcystis aeruginosa PCC7941 PC 1 170 08-23-2012
CpcU-I subfamily O53_764 ZP_20931601.1 Microcystis aeruginosa TAIHU98 PC 1 170 04-22-2013
CpcU-I subfamily Osc7112_0647 YP_007113656.1 Oscillatoria nigro-viridis PCC7112 PC+PEI 2 169 04-22-2013
CpcU-I subfamily Oscil6304_5543 YP_007088946.1 Oscillatoria acuminata PCC6304 (SAG 1449-3) PC 177 04-22-2013
CpcU-I subfamily MICCA_1100007 ZP_18815797.1 Microcystis aeruginosa PCC9432 PC 1 170 04-29-2013
CpcU-I subfamily Xen7305DRAFT_00032080 ZP_21054973.1 Xenococcus sp. PCC7305 PC+PEI 177 04-29-2013
CpcU-I subfamily Osc10802DRAFT_5465 Oscihlatopiq sp. PCC10802 PC+PEI N-term shortened (44 aa) 185 07-02-2013
CpcU-I subfamily Cha6605_3988 YP_007098477.1 Chamaesiphon minutus PCC6605 PC+PEI 183 06-20-2013
CpcU-I subfamily Sta7437_1181 YP_007131718.1 Stanieria cyanosphaera PCC7437 PC+PEI 186 06-20-2013
CpcU-I subfamily Cal6303_1972 YP_007136977.1 Calothrix sp. PCC6303 PC+PEI 2 176 06-20-2013
CpcU-I subfamily Lepto7376_2440 YP_007071553.1 Leptolyngbya sp. PCC7376 PC+PEI 183 06-20-2013
CpcU-I subfamily Pse7367_2638 YP_007103322.1 Pseudanabaena sp. PCC7367 PC+PEI 178 06-20-2013
CpcU-I subfamily Lep6406DRAFT_00043770 ZP_21044403.1 Leptolyngbya sp. PCC6406 PC+PEC 173 06-20-2013
CpcU-I subfamily GLO73106DRAFT_00011320 ZP_21051667.1 Gloeocapsa sp. PCC73106 PC+PEI 174 06-20-2013
CpcU-I subfamily Cyast_0213 YP_007163844.1 Cyanobacterium stanieri PCC7202 PC 173 06-20-2013
CpcU-I subfamily Cyan10605_0119 YP_007160321.1 Cyanobacterium aponimum PCC10605 182 06-20-2013
CpcU-I subfamily Lepto7375DRAFT_4641 ZP_18909026.1 Leptolyngbya sp. PCC7375 PC+PEI 2 169 06-20-2013
CpcU-I subfamily PCC7418_3771 YP_007170089.1 Halothece sp. PCC7418 PC 179 06-20-2013
CpcU-I subfamily Dacsa_0519 YP_007170660.1 Dactylococcopsis salina PCC8305 190 06-20-2013
CpcU-II subfamily PCC_0138 YP_002048800.1 Paulinella chromatophora M0880 PC 1 157 09-16-2012
CpcU-II subfamily BL107_11196 ZP_01469616.1 Synechococcus sp. BL107 PC+PEI+PEII 3d/CA4 154 11-04-2011
CpcU-II subfamily sync_0774 YP_729988.1 Synechococcus sp. CC9311 PC+PEI+PEII 3d/CA4 158 11-04-2011
CpcU-II subfamily Syncc9605_0889 YP_381212.1 Synechococcus sp. CC9605 PC+PEI+PEII 3c 153 11-04-2011
CpcU-II subfamily Syncc9902_1509 YP_377511.1 Synechococcus sp. CC9902 PC+PEI+PEII 3d/CA4 154 11-04-2011
CpcU-II subfamily SynRCC307_1726 YP_001227982.1 Synechococcus sp. RCC307 PC+PEI+PEII 3b 151 11-04-2011
CpcU-II subfamily RS9916_33072 ZP_01470645.1 Synechococcus sp. RS9916 PC+PEI+PEII 3d/CA4 N-term possibly 12 aa too long 169 09-16-2012
CpcU-II subfamily RS9917_01916 ZP_01081335.1 Synechococcus sp. RS9917 PC 1 156 11-04-2011
CpcU-II subfamily WH5701_14506 ZP_01083946.1 Synechococcus sp. WH5701 PC 1 162 11-04-2011
CpcU-II subfamily SynWH7803_1725 YP_001225448.1 Synechococcus sp. WH7803 PC+PEI+PEII 3a 153 11-04-2011
CpcU-II subfamily WH7805_05516 ZP_01124634.1 Synechococcus sp. WH7805 PC+PEI 2 N-term shortened (7 aa removed: MSCEDGS) 153 09-16-2012
CpcU-II subfamily SYNW1611 NP_897704.1 Synechococcus sp. WH8102 PC+PEI+PEII 3c 154 11-04-2011
CpcU-II subfamily Syn8016DRAFT_2448 ZP_08957102.1 Synechococcus sp. WH8016 PC+PEI+PEII 3a 158 12-02-2011
CpcU-II subfamily SH8109_1400 ZP_05790078.1 Synechococcus sp. WH8109 PC+PEI+PEII 3b 153 12-02-2011
CpcU-II subfamily SCB02_010100006257 ZP_07970508.1 Synechococcus sp. CB0205 PC+PEI 2 154 12-02-2011
CpcU-II subfamily SCB01_010100010455 ZP_07974079.1 Synechococcus sp. CB0101 PC 1 161 12-02-2011
CpcU-II subfamily CPCC7001_xx Cyanobium sp. PCC7001 PC 1 Found using tblastn. Orf not detected in refseq. 166 02-21-2012
CpcU-II subfamily Cyagr_1229 YP_007045748.1 Cyanobium gracile PCC6307 PC 177 04-29-2013

Model strain Model strains, Marine strains

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