CotB homologs 1 family
[fasta] [only sure] [only unsure]
Description
Members of this family contain an Armadillo-like helical fold. This family is found in all marine Synechococcus as well as some freshwater species.
Motif
A motif characterising this family is available.
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CotB homologs 1 family | sync_0128 | YP_729365.1 | Synechococcus sp. | CC9311 | PC+PEI+PEII | 3dA/CA4-A | 208 | 09-26-2011 | |
| CotB homologs 1 family | Syncc9605_0122 | YP_380453.1 | Synechococcus sp. | CC9605 | PC+PEI+PEII | 3c | 204 | 09-26-2011 | |
| CotB homologs 1 family | SH8109_0378 | ZP_05790768.1 | Synechococcus sp. | WH8109 | PC+PEI+PEII | 3bB | 204 | 09-26-2011 | |
| CotB homologs 1 family | SYNW0139 | NP_896234.1 | Synechococcus sp. | WH8102 | PC+PEI+PEII | 3c | 205 | 09-26-2011 | |
| CotB homologs 1 family | Syncc9902_0166 | YP_376184.1 | Synechococcus sp. | CC9902 | PC+PEI+PEII | 3dA/CA4-A | 203 | 09-26-2011 | |
| CotB homologs 1 family | BL107_05959 | ZP_01468938.1 | Synechococcus sp. | BL107 | PC+PEI+PEII | 3dA/CA4-A | 203 | 09-26-2011 | |
| CotB homologs 1 family | SynWH7803_0189 | YP_001223912.1 | Synechococcus sp. | WH7803 | PC+PEI+PEII | 3a | 208 | 09-26-2011 | |
| CotB homologs 1 family | WH7805_08566 | ZP_01123713.1 | Synechococcus sp. | WH7805 | PC+PEI | 2 | 208 | 09-26-2011 | |
| CotB homologs 1 family | RS9917_05100 | ZP_01079060.1 | Synechococcus sp. | RS9917 | PC | 1 | 211 | 09-26-2011 | |
| CotB homologs 1 family | RS9916_38227 | ZP_01471676.1 | Synechococcus sp. | RS9916 | PC+PEI+PEII | 3dA/CA4-A | 207 | 09-26-2011 | |
| CotB homologs 1 family | WH5701_01640 | ZP_01084821.1 | Synechococcus sp. | WH5701 | PC | 1 | 210 | 09-26-2011 | |
| CotB homologs 1 family | SynRCC307_0128 | YP_001226384.1 | Synechococcus sp. | RCC307 | PC+PEI+PEII | 3eA | 177 | 12-05-2011 | |
| CotB homologs 1 family | SCB01_010100014119 | ZP_07974801.1 | Synechococcus sp. | CB0101 | PC | 1 | 196 | 11-04-2011 | |
| CotB homologs 1 family | SCB02_010100002826 | ZP_07969839.1 | Synechococcus sp. | CB0205 | PC+PEI | 2 | 193 | 05-24-2012 | |
| CotB homologs 1 family | CPCC7001_2625 | ZP_05046435.1 | Cyanobium sp. | PCC7001 | PC | 1 | 215 | 09-26-2011 | |
| CotB homologs 1 family | Syn8016DRAFT_1730 | ZP_08956385.1 | Synechococcus sp. | WH8016 | PC+PEI+PEII | 3aA | 208 | 11-04-2011 | |
| CotB homologs 1 family | Cyan7425_3615 | YP_002484296.1 | Cyanothece sp. | PCC7425 | PC | 1 | 221 | 09-26-2011 | |
| CotB homologs 1 family | Synpcc7942_2325 | YP_401342.1 | Synechococcus elongatus | PCC7942 | PC | 1 | N-term shortened (30 aa removed : MASAIAKLSAAPASVTPCGSVKDERLSCAS) | 225 | 08-28-2012 |
| CotB homologs 1 family | syc1777_d | YP_172487.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 225 | 09-26-2011 | |
| CotB homologs 1 family | Cyagr_2203 | YP_007046657.1 | Cyanobium gracile | PCC6307 | PC | 199 | 04-29-2013 |
Model strains, Marine strains
Last update: 28 Sep 2012 7:58:12
