WH8109 strain

Subcluster: 5.1

Clade/Ecotype: II

Subclade: IIa

Phycobiliprotein types: PC+PEI+PEII

Pigment type: 3bB

Habitat: marine

Genome status: assembled contigs

Sequencing center: JCVI

Humily et al., 2013. A gene island with two possible configurations is involved in chromatic acclimation in marine Synechococcus PLoS One, 8, e84459.

Showing only sure genes

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS-II subfamily	SH8109_0894	ZP_05790285.1		197	09-26-2011
CpeT family	SH8109_0065	ZP_05789950.1		204	09-26-2011
CpeS-II subfamily	SH8109_0064	ZP_05789382.1		180	09-26-2011
CpeU-II subfamily	SH8109_0086	ZP_05788514.1		203	11-25-2011
CpeY family	SH8109_0080	ZP_05789451.1		441	09-26-2011
CpeZ family	SH8109_0079	ZP_05789880.1		212	09-26-2011
MpeU family	SH8109_0074	ZP_05788568.1		298	10-25-2011
MpeQ family	SH8109_0069	ZP_05788234.1		398	04-20-2023
RpcT family	SH8109_0091	ZP_05790483.1		197	09-26-2011
IaiH family	SH8109_1105	ZP_05789908.1		270	10-26-2011
CotB homologs 1 family	SH8109_0378	ZP_05790768.1		204	09-26-2011
RpcE subfamily	SH8109_0092	ZP_05789298.1	Sequence was incomplete (updated by FP)	257	12-05-2011
RpcF subfamily	SH8109_0093	ZP_05790743.1	Sequence was incomplete (updated by FP)	210	12-05-2011
MpeW family	SH8109_0077	ZP_05790143.1		396	08-28-2012
CpcU-II subfamily	SH8109_1400	ZP_05790078.1		153	12-02-2011

Model strains, Marine strains

Last update: 19 Jan 2018 15:13:39