CpcV family
[fasta] [only sure] [only unsure]
Description
Unknown function. A CpcV mutant had no discernable phenotype in Synechococcus sp. PCC 7002 (Shen et al., 2008)
Motif
A motif characterising this family is available.
References
- Shen et al., 2008. Biogenesis of phycobiliproteins: I. cpcS-I and cpcU mutants of the cyanobacterium Synechococcus sp. PCC 7002 define a heterodimeric phycocyanobilin lyase specific for beta-phycocyanin and allophycocyanin subunits J Biol Chem, 283, 7503-7512.
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpcV family | S7335_3639 | ZP_05037201.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 203 | 09-26-2011 | |
| CpcV family | SYNPCC7002_A2772 | YP_001736001.1 | Synechococcus sp. | PCC7002 | PC | 1 | Possible alternative start which would make sequence 28 aa shorter (MPCPGLQENVTIYKLSIDICRSSRSSSP) | 202 | 09-26-2011 |
| CpcV family | All5292 | NP_489332.1 | Anabaena (Nostoc) sp. | PCC7120 | PC+PEC | 180 | 09-26-2011 | ||
| CpcV family | Ava_2542 | YP_323052.1 | Anabaena variabilis | ATCC29413 (PCC7937) | PC+PEC | 178 | 09-27-2011 | ||
| CpcV family | Aazo_1048 | YP_003720533.1 | Anabaena (Nostoc) azollae | 0708 | PC+PEC | 186 | 09-26-2011 | ||
| CpcV family | PCC7424_0543 | YP_002375874.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpcV family | PCC8801_0182 | YP_002370442.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 180 | 09-26-2011 | |
| CpcV family | Cyan8802_0177 | YP_003135981.1 | Cyanothece sp. | PCC8802 | PC | 1 | 180 | 09-26-2011 | |
| CpcV family | Cyan7822_3176 | YP_003888405.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpcV family | FJSC11DRAFT_2876 | ZP_08986670.1 | Fischerella sp. (Mastigocladus laminosus) | JSC-11 | PC+PEC | 178 | 11-04-2011 | ||
| CpcV family | gll1531 | NP_924477.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 174 | 09-26-2011 | |
| CpcV family | GL6909_1397 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 179 | 05-31-2011 | ||
| CpcV family | L8106_20770 | ZP_01622676.1 | Lyngbya aestuarii | CCY9616 (PCC8106/CCY8106) | PC | 1 | 179 | 09-26-2011 | |
| CpcV family | MAE_43410 | YP_001659355.1 | Microcystis aeruginosa | NIES-843 | PC | 1 | 179 | 09-26-2011 | |
| CpcV family | N9414_09601 | ZP_01632591.1 | Nodularia spumigena | CCY9414 | PC | 1 | 180 | 09-26-2011 | |
| CpcV family | Npun_R5841 | YP_001869082.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 180 | 09-26-2011 | |
| CpcV family | Synpcc7942_0364 | YP_399383.1 | Synechococcus elongatus | PCC7942 | PC | 1 | 183 | 09-26-2011 | |
| CpcV family | syc1149_c | YP_171859.1 | Synechococcus elongatus | PCC6301 (ATCC 27144) | PC | 1 | 183 | 09-26-2011 | |
| CpcV family | CRD_01019 | ZP_06304158.1 | Raphidiopsis brookii | D9 | PC | 1 | 178 | 10-19-2011 | |
| CpcV family | CRC_02537 | ZP_06309054.1 | Cylindrospermopsis raciborskii | CS-505 | PC | 1 | 178 | 10-19-2011 | |
| CpcV family | IPF_3889 | CAO91269.1 | Microcystis aeruginosa | PCC7806 | PC | 1 | 179 | 10-20-2011 | |
| CpcV family | MICAI_660015 | ZP_10230065.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 179 | 08-22-2012 | |
| CpcV family | MICAG_130027 | CCI21366.1 | Microcystis aeruginosa | PCC9808 | PC | 1 | 179 | 08-22-2012 | |
| CpcV family | MICAB_580007 | CCH99120.1 | Microcystis aeruginosa | PCC9717 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAK_2740002 | CCI36804.1 | Microcystis aeruginosa | PCC9701 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAC_6140009 | CCI04940.1 | Microcystis aeruginosa | PCC9443 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | MICAD_2990036 | CCI08086.1 | Microcystis aeruginosa | PCC7941 | PC | 1 | 179 | 08-23-2012 | |
| CpcV family | Nos7524_2791 | YP_007076213.1 | Nostoc sp. | PCC7524 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Syn7509DRAFT_00027440 | ZP_21040864.1 | Synechocystis sp. | PCC7509 | PC | 185 | 04-23-2013 | ||
| CpcV family | Anacy_2625 | YP_007156976.1 | Anabaena cylindrica | PCC7122 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Cylst_5166 | YP_007149887.1 | Cylindrospermum stagnale | PCC7417 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | Mic7113_6350 | YP_007125343.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 181 | 04-23-2013 | |
| CpcV family | ZP_20934830 | ZP_20934830.1 | Microcystis aeruginosa | TAIHU98 | PC | 1 | 179 | 04-23-2013 | |
| CpcV family | Glo7428_0828 | YP_007126571.1 | Gloeocapsa sp. | PCC7428 | PC | 179 | 04-23-2013 | ||
| CpcV family | Chro_2758 | YP_007092096.1 | Chroococcidiopsis thermalis | PCC7203 | PC+PEC | 182 | 04-23-2013 | ||
| CpcV family | Dacsa_3059 | YP_007172949.1 | Dactylococcopsis salina | PCC8305 | 178 | 04-23-2013 | |||
| CpcV family | Ple7327_1943 | YP_007080842.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | N-term shortened (12 aa) | 179 | 07-02-2013 | |
| CpcV family | GLO73106DRAFT_00007680 | ZP_21052075.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 176 | 04-23-2013 | ||
| CpcV family | Pse7367_3862 | YP_007083521.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 201 | 04-23-2013 | ||
| CpcV family | PCC7418_0245 | YP_007166696.1 | Halothece sp. | PCC7418 | PC | 178 | 04-23-2013 | ||
| CpcV family | Xen7305DRAFT_00016660 | ZP_21056473.1 | Xenococcus sp. | PCC7305 | PC+PEI | 181 | 04-23-2013 | ||
| CpcV family | ZP_18907669 | ZP_18907669.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 177 | 04-23-2013 | |
| CpcV family | Lepto7376_3174 | YP_007072237.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 176 | 04-23-2013 | ||
| CpcV family | Riv7116_0828 | YP_007053959.1 | Rivularia sp. | PCC7116 | PC+PEC | 180 | 04-23-2013 | ||
| CpcV family | GEI7407_3497 | YP_007111016.1 | Geitlerinema sp. | PCC7407 | PC | 179 | 04-29-2013 | ||
| CpcV family | Nos7107_4105 | YP_007051806.1 | Nostoc sp. | PCC7107 | PC+PEC | 179 | 04-29-2013 | ||
| CpcV family | MICCA_960048 | ZP_18815548.1 | Microcystis aeruginosa | PCC9432 | PC | 1 | 179 | 04-29-2013 | |
| CpcV family | Cal7507_0808 | YP_007064126.1 | Calothrix sp. | PCC7507 | PC+PEC | 180 | 04-29-2013 | ||
| CpcV family | Cha6605_0407 | YP_007095229.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 182 | 04-29-2013 | ||
| CpcV family | Oscil6304_1493 | YP_007085118.1 | Oscillatoria acuminata | PCC6304 (SAG 1449-3) | PC | 179 | 04-29-2013 | ||
| CpcV family | Sta7437_3035 | YP_007133519.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 180 | 04-29-2013 | ||
| CpcV family | Cal6303_4023 | YP_007138911.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 180 | 04-29-2013 | |
| CpcV family | Lep6406DRAFT_00020650 | ZP_21046658.1 | Leptolyngbya sp. | PCC6406 | PC+PEC | 178 | 04-29-2013 | ||
| CpcV family | LepboDRAFT_0977 | Leptolyngbya boryana | PCC6306 | PC | 179 | 06-11-2013 | |||
| CpcV family | Fis9431DRAFT_0656 | Fischerella sp. | PCC9431 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | FIS9605DRAFT_06446 | Fischerella sp. | PCC9605 | PC+PEC | 176 | 06-12-2013 | |||
| CpcV family | FisPCC73103_2832 | Fischerella muscicola | PCC73103 (SAG 1427-1) | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Scytonema_PCC7110_joined_9349 | Scytonema hofmanni | PCC7110 | PC+PEC | 190 | 06-12-2013 | |||
| CpcV family | Osc10802DRAFT_3493 | Oscillatoria sp. | PCC10802 | PC+PEI | 178 | 06-12-2013 | |||
| CpcV family | PCC9339DRAFT_05124 | Fischerella sp. | PCC9339 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Ana7108_1911 | Anabaena sp. | PCC7108 | PC+PEC | 180 | 06-12-2013 | |||
| CpcV family | Chloroglopsis_PCC9212_joined_3827 | Chlorogloeopsis sp. | PCC9212 | PC+PEC | 196 | 06-12-2013 | |||
| CpcV family | UYC_07367 | Chlorogloeopsis fritschii | PCC6912 | PC+PEC | 196 | 06-12-2013 | |||
| CpcV family | FisPCC7414_2733 | Fischerella muscicola | PCC7414 | PC+PEC | 178 | 06-12-2013 | |||
| CpcV family | Fischerella_sp._PCC7521_3976 | Fischerella thermalis | PCC7521 | PC+PEC | 178 | 06-12-2013 |
Model strains, Marine strains
Last update: 06 Nov 2012 14:47:16
