WH8102 strain

Subcluster: 5.1

Clade/Ecotype: III

Subclade: IIIa

Phycobiliprotein types: PC+PEI+PEII

Pigment type: 3c

Habitat: marine

Remark: Strain in which RpcG has been characterized (Blot et al., 2009)

Refseq record: NC_005070

Genome status: complete

Sequencing center: JGI

Blot et al., 2009. Phycourobilin in Trichromatic Phycocyanin from Oceanic Cyanobacteria Is Formed Post-translationally by a Phycoerythrobilin Lyase-Isomerase J Biol Chem, 284, 9290-9298.
Palenik et al., 2003. The genome of a motile marine Synechococcus Nature, 424, 1037-1042.
Six et al., 2007. Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study Genome Biol, 8, R259.

Showing only sure genes

Gene	Locus tag	Genbank	Length	Last change
CpcS-II subfamily	SYNW0315	NP_896410.1	198	09-26-2011
CpeT family	SYNW2003	NP_898094.1	204	09-26-2011
CpeS-II subfamily	SYNW2002	NP_898093.1	180	09-26-2011
CpeU-II subfamily	SYNW2019	NP_898110.1	204	11-25-2011
CpeY family	SYNW2013	NP_898104.1	441	09-26-2011
CpeZ family	SYNW2012	NP_898103.1	206	09-26-2011
MpeU family	SYNW2011	NP_898102.1	301	10-25-2011
MpeQ family	SYNW2007	NP_898098.1	398	04-20-2023
RpcG family	SYNW2025	NP_898116.1	466	09-26-2011
RpcT family	SYNW2024	NP_898115.1	197	09-26-2011
IaiH family	SYNW0621	NP_896714.1	269	10-26-2011
CotB homologs 1 family	SYNW0139	NP_896234.1	205	09-26-2011
CpcU-II subfamily	SYNW1611	NP_897704.1	154	11-04-2011

Model strains, Marine strains

Last update: 28 Aug 2012 14:17:59