CyanoLyase

PCC7335 strain

[fasta] [gff] [show all]

Lineage

  • Prokarya
    • Cyanobacteria
      • Chroococcales
        • Synechococcus
          • sp.

Strain information

Subcluster: 4

Phycobiliprotein types: PC+PEI

Pigment type: CA3

Habitat: marine

Genome sequence

Refseq record: NZ_ABRV00000000

Genome status: assembled contigs

Sequencing center: JCVI

Showing only sure genes

Gene Locus tag Genbank Remark Length Last change
CpcS-I subfamily S7335_4321 ZP_05037881.1 This sequence is closely related to CpcS-I, but the genome of PCC7335 apparently does not contain any CpcU-I, possibly because it is incomplete. 200 10-03-2012
CpcT family S7335_2352 ZP_05035920.1 196 09-26-2011
CpcV family S7335_3639 ZP_05037201.1 203 09-26-2011
CpeT family S7335_3658 ZP_05037220.1 213 09-26-2011
CpeS-I subfamily S7335_2433 ZP_05036001.1 176 09-26-2011
CpeU-I subfamily S7335_5494 ZP_05039049.1 185 11-25-2011
CpeY family S7335_3216 ZP_05036780.1 N-term shortened (11 aa removed by FP: MQAAFDRFLTA) 420 09-26-2011
CpeZ family S7335_2652 ZP_05036218.1 209 09-26-2011
CpeF family S7335_3548 ZP_05037110.1 296 10-25-2011
IaiH family S7335_4906 ZP_05038464.1 255 10-26-2011
CotB family S7335_4506 ZP_05038065.1 220 09-26-2011
NblB family S7335_5595 ZP_05039147.1 Blastp 223 09-26-2011
CpcS homologs family S7335_2999 ZP_05036565.1 190 11-16-2011
T homologs family S7335_1475 ZP_05035043.1 210 11-24-2011
CotB homologs 2 family S7335_3847 ZP_05037409.1 227 11-24-2011
L8106_16949 homologs family S7335_5516 ZP_05039071.1 439 12-05-2011

Model strain Model strains, Marine strains

Last update: 28 Aug 2012 15:09:52

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