CpeS-I subfamily
Description
The CpeS-I from Fremyella diplosiphon strain UTEX481 was characterized as a PEB:Cys-80 beta-PE lyase (Biswas et al., 2011). This subfamily contains all PE-containing cyanobacteria outside the marine Synechococcus/Prochlorococcus branch
Motif
A motif characterising this family is available.
References
- Biswas et al., 2011. Characterization of the activities of the CpeY, CpeZ, and CpeS bilin lyases in phycoerythrin biosynthesis in Fremyella diplosiphon strain UTEX 481 J Biol Chem, 286(41), 35509-21.
Showing only sure genes
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpeS-I subfamily | S7335_2433 | ZP_05036001.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 176 | 09-26-2011 | |
| CpeS-I subfamily | CwatDRAFT_5719 | ZP_00514726.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 179 | 09-26-2011 | ||
| CpeS-I subfamily | PCC7424_5723 | YP_002381018.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 177 | 09-26-2011 | |
| CpeS-I subfamily | PCC8801_4527 | YP_002364804.1 | Cyanothece sp. | PCC8801 | PC+PEI | 2 | 179 | 09-26-2011 | |
| CpeS-I subfamily | Cyan7822_4033 | YP_003889233.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 177 | 09-26-2011 | |
| CpeS-I subfamily | gvip162 | NP_924138.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 180 | 11-24-2011 | |
| CpeS-I subfamily | GL6909_3548 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 179 | 05-31-2011 | ||
| CpeS-I subfamily | Npun_F0737 | YP_001864432.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 178 | 09-26-2011 | |
| CpeS-I subfamily | Tery_4106 | YP_723587.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | 173 | 09-26-2011 | ||
| CpeS-I subfamily | OSCI_1700002 | ZP_07110201.1 | Oscillatoria sp. | PCC6506 (PCC9029/ATCC29081 /UTEX 1547) | PC | 1 | N-term shortened (2 aa removed: MP) | 177 | 09-16-2012 |
| CpeS-I subfamily | LYNGBM3L_16710 | ZP_08428242.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 178 | 10-19-2011 | |
| CpeS-I subfamily | CWATWH0003_1105 | EHJ14216.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 179 | 02-22-2012 | ||
| CpeS-I subfamily | MICAI_380005 | ZP_10229442.1 | Microcystis sp. | T1-4 | PC+PEI | 2 | 177 | 08-22-2012 | |
| CpeS-I subfamily | Osc7112_1030 | YP_007114004.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 181 | 04-24-2013 | |
| CpeS-I subfamily | Ple7327_0106 | YP_007079149.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 178 | 04-24-2013 | ||
| CpeS-I subfamily | Mic7113_4756 | YP_007123835.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 175 | 04-24-2013 | |
| CpeS-I subfamily | Pse7367_3898 | YP_007083553.1 | Pseudanabaena sp. | PCC7367 | PC+PEI | 183 | 04-24-2013 | ||
| CpeS-I subfamily | GLO73106DRAFT_00012580 | ZP_21051594.1 | Gloeocapsa sp. | PCC73106 | PC+PEI | 176 | 04-24-2013 | ||
| CpeS-I subfamily | Xen7305DRAFT_00019040 | ZP_21056252.1 | Xenococcus sp. | PCC7305 | PC+PEI | 181 | 04-24-2013 | ||
| CpeS-I subfamily | Lepto7376_0477 | YP_007069743.1 | Leptolyngbya sp. | PCC7376 | PC+PEI | 177 | 04-24-2013 | ||
| CpeS-I subfamily | ZP_18907660 | ZP_18907660.1 | Leptolyngbya sp. | PCC7375 | PC+PEI | 2 | 175 | 04-24-2013 | |
| CpeS-I subfamily | Cal6303_1334 | YP_007136366.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 180 | 04-29-2013 | |
| CpeS-I subfamily | Sta7437_0960 | YP_007131508.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 179 | 04-29-2013 | ||
| CpeS-I subfamily | Cha6605_4067 | YP_007098550.1 | Chamaesiphon minutus | PCC6605 | PC+PEI | 178 | 04-29-2013 | ||
| CpeS-I subfamily | Osc10802DRAFT_5368 | Oscillatoria sp. | PCC10802 | PC+PEI | 194 | 06-12-2013 | |||
| CpeS-I subfamily | Pse7429DRAFT_1237 | ZP_21065324.1 | Pseudanabaena sp. (biceps) | PCC7429 | PC | 180 | 06-20-2013 |
Model strains, Marine strains
Last update: 06 Nov 2012 12:03:34
