NIES-39 strain
Lineage
- Prokarya
- Cyanobacteria
- Oscillatoriales
- Arthrospira (Spirulina)
- platensis
Strain information
Phycobiliprotein types: PC
Pigment type: 1
Habitat: freshwater
Genome sequence
Refseq record: AP011615
Genome status: incomplete (19 scaffolds)
Sequencing center: National Institute of Technology and Evaluation (Tokyo)
References
- Fujisawa et al., 2010. Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39 DNA Res, 17, 85-103.
Showing only sure genes
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-I subfamily | NIES39_A02700 | BAI88109.1 | 197 | 10-20-2011 | |
| CpcU-I subfamily | NIES39_R01090 | BAI94418.1 | 174 | 10-20-2011 | |
| CpcT family | NIES39_A06470 | BAI88485.1 | 198 | 10-20-2011 | |
| CpcE-I subfamily | NIES39_D02010 | BAI89621.1 | 291 | 10-20-2011 | |
| CpcF-I subfamily | NIES39_D02000 | BAI89620.1 | 210 | 10-20-2011 | |
| NblB family | NIES39_D03910 | BAI89809.1 | 220 | 10-28-2011 | |
| CotB homologs 2 family | NIES39_J05080 | BAI91554.1 | 224 | 10-28-2011 | |
| IaiH family | NIES39_Q01300 | BAI94138.1 | 261 | 11-02-2011 | |
| L8106_11777 homologs family | NIES39_O04890 | BAI93736.1 | 314 | 12-01-2011 | |
| L8106_16949 homologs family | NIES39_H00170 | BAI90942.1 | 410 | 12-05-2011 | |
| MC7420_3535 homologs family | NIES39_J02930 | BAI91340.1 | 1219 | 01-10-2012 | |
| L8106_22089 homologs family | NIES39_A07090 | BAI88547.1 | 360 | 12-06-2011 | |
| MC7420_3535 homologs family | NIES39_K01090 | BAI91758.1 | 892 | 12-06-2011 |
Model strains, Marine strains
Last update: 25 Sep 2012 16:01:25
