WH0003 strain
Lineage
- Prokarya
- Cyanobacteria
- Chroococcales
- Crocosphaera
- watsonii
Strain information
Phycobiliprotein types: PC+PEI
Habitat: marine
Remark: Unlike WH8501, this strain seemingly does not possess a rpcG-like gene, So Cys-82 alpha-PC likely binds PCB (or PEB?).
Genome sequence
Refseq record: AESD00000000
Genome status: unassembled contigs
Sequencing center: University of California at Santa Cruz
References
- Bench et al., 2011. Two strains of Crocosphaera watsonii with highly conserved genomes are distinguished by strain-specific features Front Microbiol, 2, 261.
Showing only sure genes
| Gene | Locus tag | Genbank | Remark | Length | Last change |
|---|---|---|---|---|---|
| CpcS-I subfamily | CWATWH0003_0565 | EHJ14767.1 | 197 | 02-22-2012 | |
| CpcU-I subfamily | CWATWH0003_2252 | EHJ13063.1 | 175 | 02-22-2012 | |
| CpeS-I subfamily | CWATWH0003_1105 | EHJ14216.1 | 179 | 02-22-2012 | |
| CpcT family | CWATWH0003_2153 | EHJ13154.1 | 196 | 02-22-2012 | |
| CpeT family | CWATWH0003_1104 | EHJ14215.1 | 200 | 02-22-2012 | |
| IaiH family | CWATWH0003_2056 | EHJ13243.1 | 250 | 02-22-2012 | |
| NblB family | CWATWH0003_3083 | EHJ12197.1 | 219 | 02-22-2012 | |
| L8106_16949 homologs family | CWATWH0003_1645 | EHJ13671.1 | 377 | 02-22-2012 | |
| CotB family | CWATWH0003_4320 | EHJ10938.1 | 218 | 02-22-2012 | |
| CotB homologs 2 family | CWATWH0003_2253 | EHJ13064.1 | 213 | 02-22-2012 | |
| CpcF-I subfamily | CWATWH0003_3385 | EHJ11901.1 | 212 | 02-22-2012 | |
| CpeY family | CWATWH0003_0669 | EHJ14661.1 | 426 | 02-22-2012 | |
| CpeZ family | CWATWH0003_0668 | EHJ14660.1 | 204 | 02-22-2012 |
Model strains, Marine strains
Last update: 12 Jun 2013 17:01:53
