CotB family
Description
Described in Balabas et al. (2003) as being involved in the activation of green light-induced genes during complementary chromatic adaptation, but given its presence in strains with a variety of pigmentation, it most likely has another yet-to-be determined function.
Motif
A motif characterising this family is available.
References
- Balabas et al., 2003. CotB is essential for complete activation of green light-induced genes during complementary chromatic adaptation in Fremyella diplosiphon Mol Microbiol, 50, 781-793.
Showing only sure genes
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CotB family | S7335_4506 | ZP_05038065.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | 220 | 09-26-2011 | |
| CotB family | CwatDRAFT_1185 | ZP_00517831.1 | Crocosphaera watsonii | WH8501 | PC+PEI | 218 | 09-26-2011 | ||
| CotB family | PCC7424_5727 | YP_002381022.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 218 | 09-26-2011 | |
| CotB family | PCC7424_1391 | YP_002376703.1 | Cyanothece sp. | PCC7424 | PC+PEI | 2 | 219 | 09-26-2011 | |
| CotB family | Cyan7425_3035 | YP_002483730.1 | Cyanothece sp. | PCC7425 | PC | 1 | 222 | 09-26-2011 | |
| CotB family | Cyan7822_0127 | YP_003885453.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 219 | 09-26-2011 | |
| CotB family | Cyan7822_4037 | YP_003889237.1 | Cyanothece sp. | PCC7822 | PC+PEI | 2 | 220 | 09-26-2011 | |
| CotB family | gi|33090216|gb|AAP93903.1| | AAP93903.1 | Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) | Fd33 (UTEX481/PCC7601) | PC+PEI | CA3 | 219 | 09-26-2011 | |
| CotB family | gvip178 | NP_924203.1 | Gloeobacter violaceus | PCC7421 | PC+PEI | 2 | 217 | 11-24-2011 | |
| CotB family | GL6909_0631 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 219 | 08-30-2011 | ||
| CotB family | Npun_R0734 | YP_001864429.1 | Nostoc punctiforme | ATCC29133 (PCC73102) | PC+PEI | 2 | 220 | 09-26-2011 | |
| CotB family | Tery_2382 | YP_722075.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | N-term shortened (15 aa removed: MLVYVKKGKQNSQII) | 219 | 09-26-2011 | |
| CotB family | LYNGBM3L_16600 | ZP_08428239.1 | Lyngbya majuscula | 3L | PC+PEI | 2 | 218 | 10-28-2011 | |
| CotB family | MicvaDRAFT_0237 | ZP_08495395.1 | Microcoleus vaginatus | FGP-2 | PC | 1 | 218 | 10-28-2011 | |
| CotB family | GL6909_3542 | Gloeothece sp. | PCC6909/1 | PC+PEI | 2 | 218 | 11-24-2011 | ||
| CotB family | CWATWH0003_4320 | EHJ10938.1 | Crocosphaera watsonii | WH0003 | PC+PEI | 218 | 02-22-2012 | ||
| CotB family | Ple7327_3416 | YP_007082181.1 | Pleurocapsa sp. | PCC7327 | PC+PEI | 218 | 04-24-2013 | ||
| CotB family | Mic7113_4739 | YP_007123818.1 | Microcoleus sp. | PCC7113 | PC+PEI | 2 | 227 | 04-24-2013 | |
| CotB family | Xen7305DRAFT_00028590 | ZP_21055352.1 | Xenococcus sp. | PCC7305 | PC+PEI | 218 | 04-24-2013 | ||
| CotB family | Osc7112_1071 | YP_007114038.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 218 | 04-24-2013 | |
| CotB family | Osc7112_1024 | YP_007113998.1 | Oscillatoria nigro-viridis | PCC7112 | PC+PEI | 2 | 218 | 04-24-2013 | |
| CotB family | Sta7437_3034 | YP_007133518.1 | Stanieria cyanosphaera | PCC7437 | PC+PEI | 218 | 04-29-2013 | ||
| CotB family | Cal6303_3397 | YP_007138304.1 | Calothrix sp. | PCC6303 | PC+PEI | 2 | 219 | 04-29-2013 | |
| CotB family | Osc10802DRAFT_2573 | Oscillatoria sp. | PCC10802 | PC+PEI | 218 | 06-12-2013 |
Model strains, Marine strains
Last update: 29 Aug 2012 18:37:40
