PCC6803 strain

Also known as: ATCC27184

Phycobiliprotein types: PC

Pigment type: 1

Habitat: freshwater

Remark: Strain in which CpcT (Bolte et al, 2008), CpcE/F (Alvey et al, 2011) and NblB (Li & Sherman, 2002) have been characterized

Refseq record: NC_000911

Genome status: complete

Sequencing center: Kazusa

Alvey et al., 2011. Attachment of noncognate chromophores to CpcA of Synechocystis sp. PCC 6803 and Synechococcus sp. PCC 7002 by heterologous expression in Escherichia coli Biochemistry, 50, 4890-4902.
Bolte et al., 2008. Complementation of a phycocyanin-bilin lyase from Synechocystis sp. PCC 6803 with a nucleomorph-encoded open reading frame from the cryptophyte Guillardia theta BMC Plant Biol, 8, 56.
Kaneko et al., 1996. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions DNA Res, 3, 109-136.
Li et al., 2002. Characterization of Synechocystis sp. strain PCC 6803 and Delta nbl mutants under nitrogen-deficient conditions Archiv Microbiol, 178, 256-266.

Showing only sure genes

Gene	Locus tag	Genbank	Remark	Length	Last change
CpcS-I subfamily	slr2049	NP_440437.1		192	09-26-2011
CpcT family	slr1649	NP_441787.1		196	09-26-2011
CpcU-I subfamily	Sll0853	NP_441116.1	N-term shortened (11 aa removed: MKPVAPRSFFA)	175	09-16-2012
IaiH family	slr1098	NP_440077.1		252	10-26-2011
CotB homologs 2 family	slr1687	NP_441698.1		223	09-26-2011
CpcE-I subfamily	slr1878	NP_441003.1		272	09-26-2011
CpcF-I subfamily	sll1051	NP_439974.1		214	09-26-2011
NblB family	sll1663	NP_440142.1	Blastp	220	09-26-2011

Model strains, Marine strains

Last update: 24 Aug 2012 10:54:00