CpeF-MpeU-V-X superfamily
Description
The phylogeny of this lyase superfamily was described by Carrigee et al. (2021).
References
- Carrigee et al., 2021. MpeV is a lyase isomerase that ligates a doubly linked phycourobilin on the β-subunit of phycoerythrin I and II in marine Synechococcus J Biol Chem, 296, 100031.
Showing only unsure genes
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpeF family | Tery_0978 | YP_720832.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | N-term shortened (24 aa removed) | 310 | 08-30-2012 | |
| CpeF family | Tery_0987 | YP_720840.1 | Trichodesmium erythraeum | IMS101 | PC+PEI | Best BlastP hit on CpeF (but lower than Tery_0978) | 285 | 08-30-2012 | |
| CpeF family | S7335_4282 | ZP_05037842.1 | Synechococcus sp. | PCC7335 | PC+PEI | CA3 | Low blast and protomatch score. | 332 | 01-02-2012 |
| CpeF family | CWATWH0003_5310t4 | EHJ09925.1 | Crocosphaera watsonii | WH0003 | PC+PEI | incomplete n-term (start of contig) | 262 | 02-22-2012 |
Model strains, Marine strains
Last update: 20 Apr 2023 10:01:32
