CpeS-I subfamily
Description
The CpeS-I from Fremyella diplosiphon strain UTEX481 was characterized as a PEB:Cys-80 beta-PE lyase (Biswas et al., 2011). This subfamily contains all PE-containing cyanobacteria outside the marine Synechococcus/Prochlorococcus branch
Motif
A motif characterising this family is available.
References
- Biswas et al., 2011. Characterization of the activities of the CpeY, CpeZ, and CpeS bilin lyases in phycoerythrin biosynthesis in Fremyella diplosiphon strain UTEX 481 J Biol Chem, 286(41), 35509-21.
Showing only unsure genes
| Gene | Locus tag | Genbank | Species | Strain | PBP in rods | Pigment type | Remark | Length | Last change |
|---|---|---|---|---|---|---|---|---|---|
| CpeS-I subfamily | gi|145967347|gb|ABP99029.1| | ABP99029.1 | Fremyella diplosiphon (Tolypothrix sp. / Calothrix sp.) | Fd33 (UTEX481/PCC7601) | PC+PEI | CA3 | N-term shortened (6 aa removed: METKVL). C-term much longer than in other CpeS-I sequences and also includes a specific sequence at between aa 103-112. | 215 | 09-17-2012 |
Model strains, Marine strains
Last update: 06 Nov 2012 12:03:34
