PCC7942 strain

Subcluster: 1.1

Phycobiliprotein types: PC

Pigment type: 1

Habitat: freshwater

Remark: Strain in which cpcE/F (Bhalerao et al, 1994) and NblB (Dolganov & Grossman, 1999) have been characterized.

Refseq record: NC_007604

Genome status: complete

Sequencing center: JGI

Bhalerao et al., 1994. Cloning of the cpcE and cpcF genes from Synechococcus sp. PCC 6301 and their inactivation in Synechococcus sp. PCC 7942 Plant Mol Biol, 26, 313-326.
Delaye et al., 2011. Blueprint for a minimal photoautotrophic cell: conserved and variable genes in Synechococcus elongatus PCC 7942 BMC Genomics, 12, 25.
Dolganov et al., 1999. A polypeptide with similarity to phycocyanin alpha-subunit phycocyanobilin lyase involved in degradation of phycobilisomes J Bacteriol, 181, 610-617.

Showing only unsure genes

Gene	Locus tag	Genbank	Remark	Length	Last change
CotB homologs 1 family	Synpcc7942_2325	YP_401342.1	N-term shortened (30 aa removed : MASAIAKLSAAPASVTPCGSVKDERLSCAS)	225	08-28-2012

Model strains, Marine strains

Last update: 28 Aug 2012 15:20:29