CyanoLyase

BL107 strain

Lineage

  • Prokarya
    • Cyanobacteria
      • Chroococcales
        • Synechococcus
          • sp.

Strain information

Subcluster: 5.1

Clade/Ecotype: IV

Subclade: IVa

Phycobiliprotein types: PC+PEI+PEII

Pigment type: 3dA/CA4-A

Habitat: marine

Genome sequence

Refseq record: NZ_AATZ01000000

Genome status: complete

Sequencing center: JCVI

References

  • Dufresne et al., 2008. Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria Genome Biol, 9, R90.
  • Humily et al., 2013. A gene island with two possible configurations is involved in chromatic acclimation in marine Synechococcus PLoS One, 8, e84459.
  • Mazard et al., 2012. Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus Environmental Microbiology, 14, 372–386.
  • Six et al., 2007. Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study Genome Biol, 8, R259.

Showing only sure genes

Gene Locus tag Genbank Remark Length Last change
CpcS-II subfamily BL107_17200 ZP_01468673.1 198 09-26-2011
CpeT family BL107_08986 ZP_01469900.1 204 09-26-2011
CpeS-II subfamily BL107_08991 ZP_01469901.1 178 09-26-2011
CpeU-II subfamily BL107_08896 ZP_01469882.1 N-term extended (8 aa added) 205 09-17-2012
CpeY family BL107_08931 ZP_01469889.1 444 09-26-2011
CpeZ family BL107_08936 ZP_01469890.1 209 09-26-2011
MpeU family BL107_08941 ZP_01469891.1 298 10-25-2011
MpeV family BL107_08916 ZP_01469886.1 308 04-20-2023
MpeY family BL107_08961 ZP_01469895.1 400 09-26-2011
MpeZ family BL107_10891 ZP_01469555.1 409 09-26-2011
RpcG family BL107_08866 ZP_01469876.1 459 09-26-2011
RpcT family BL107_08871 ZP_01469877.1 192 09-26-2011
IaiH family BL107_16005 ZP_01468434.1 270 10-26-2011
CotB homologs 1 family BL107_05959 ZP_01468938.1 203 09-26-2011
CpcU-II subfamily BL107_11196 ZP_01469616.1 154 11-04-2011

Model strain Model strains, Marine strains

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